Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
COPS6Q7L5N1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.77■■□□□ 1.88
COPS6Q7L5N1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COPS6Q7L5N1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
COPS6Q7L5N1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
COPS6Q7L5N1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COPS6Q7L5N1 AC093787.1-201ENST00000450396 207 ntBASIC26.76■■□□□ 1.87
COPS6Q7L5N1 AC098934.4-201ENST00000564127 592 ntBASIC26.76■■□□□ 1.87
COPS6Q7L5N1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.76■■□□□ 1.87
COPS6Q7L5N1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
COPS6Q7L5N1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.76■■□□□ 1.87
COPS6Q7L5N1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.76■■□□□ 1.87
COPS6Q7L5N1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 AC016405.3-201ENST00000607710 860 ntBASIC26.75■■□□□ 1.87
COPS6Q7L5N1 OR10C1-204ENST00000622521 1039 ntBASIC26.75■■□□□ 1.87
COPS6Q7L5N1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COPS6Q7L5N1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.74■■□□□ 1.87
COPS6Q7L5N1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 AC069152.1-201ENST00000438030 544 ntBASIC26.73■■□□□ 1.87
COPS6Q7L5N1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 AC243732.1-201ENST00000612648 864 ntBASIC26.73■■□□□ 1.87
COPS6Q7L5N1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.73■■□□□ 1.87
COPS6Q7L5N1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 C11orf96-202ENST00000528572 1834 ntBASIC26.72■■□□□ 1.87
COPS6Q7L5N1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 AC068473.5-201ENST00000616428 2072 ntBASIC26.72■■□□□ 1.87
COPS6Q7L5N1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COPS6Q7L5N1 MKRN4P-201ENST00000444706 1521 ntBASIC26.71■■□□□ 1.87
COPS6Q7L5N1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 MIPEPP3-201ENST00000412105 444 ntBASIC26.71■■□□□ 1.87
COPS6Q7L5N1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 CD99P1-205ENST00000527459 561 ntBASIC26.71■■□□□ 1.87
COPS6Q7L5N1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 AL591742.1-201ENST00000604433 565 ntBASIC26.71■■□□□ 1.87
COPS6Q7L5N1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
COPS6Q7L5N1 AC242852.2-201ENST00000615738 1807 ntBASIC26.7■■□□□ 1.87
COPS6Q7L5N1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
COPS6Q7L5N1 ABHD17AP1-201ENST00000358206 933 ntBASIC26.7■■□□□ 1.86
COPS6Q7L5N1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
COPS6Q7L5N1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
COPS6Q7L5N1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
COPS6Q7L5N1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms