Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 KRT18P11-201ENST00000435214 1283 ntBASIC20.21■□□□□ 0.83
RNF44Q7L0R7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 AL137784.2-201ENST00000607332 1000 ntBASIC20.21■□□□□ 0.83
RNF44Q7L0R7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF44Q7L0R7 EP400NL-214ENST00000641289 2402 ntBASIC20.21■□□□□ 0.83
RNF44Q7L0R7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 KRT18P20-201ENST00000548986 1279 ntBASIC20.2■□□□□ 0.82
RNF44Q7L0R7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF44Q7L0R7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 UBE2DNL-204ENST00000602536 740 ntBASIC20.19■□□□□ 0.82
RNF44Q7L0R7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF44Q7L0R7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 AC008175.2-201ENST00000612840 297 ntBASIC20.18■□□□□ 0.82
RNF44Q7L0R7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.18■□□□□ 0.82
RNF44Q7L0R7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF44Q7L0R7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 POU5F1P4-201ENST00000413175 1085 ntBASIC20.17■□□□□ 0.82
RNF44Q7L0R7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF44Q7L0R7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF44Q7L0R7 AC004911.1-201ENST00000416316 871 ntBASIC20.16■□□□□ 0.82
RNF44Q7L0R7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms