Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 AC068587.7-201ENST00000641602 218 ntBASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR3Q6ZTQ4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 AC003102.1-202ENST00000563394 1796 ntBASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 AL049796.1-201ENST00000565336 1766 ntBASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 IGHV3-19-201ENST00000521488 291 ntBASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 RARRES2P6-201ENST00000567333 442 ntBASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDHR3Q6ZTQ4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 FEM1AP1-201ENST00000431297 1995 ntBASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR3Q6ZTQ4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 AC010141.3-201ENST00000456659 717 ntBASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CDHR3Q6ZTQ4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 OXCT2P1-201ENST00000447263 1535 ntBASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 AC026271.2-201ENST00000428091 497 ntBASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR3Q6ZTQ4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms