Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COLCA1Q6ZS62 AL137060.1-201ENST00000618151 2648 ntBASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 CCDC92B-201ENST00000575506 885 ntBASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COLCA1Q6ZS62 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.18■□□□□ 0.5
COLCA1Q6ZS62 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 AC005229.4-201ENST00000610085 2198 ntBASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 AC138907.5-202ENST00000569484 235 ntBASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLCA1Q6ZS62 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.16■□□□□ 0.5
COLCA1Q6ZS62 KRT18P14-201ENST00000534205 1250 ntBASIC18.16■□□□□ 0.5
COLCA1Q6ZS62 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COLCA1Q6ZS62 AL049796.1-201ENST00000565336 1766 ntBASIC18.16■□□□□ 0.5
COLCA1Q6ZS62 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.16■□□□□ 0.5
COLCA1Q6ZS62 AF106564.1-201ENST00000607058 2553 ntBASIC18.16■□□□□ 0.5
COLCA1Q6ZS62 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COLCA1Q6ZS62 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.15■□□□□ 0.5
COLCA1Q6ZS62 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COLCA1Q6ZS62 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
COLCA1Q6ZS62 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 POU5F1P4-201ENST00000413175 1085 ntBASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms