Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD3Q6PCD5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD3Q6PCD5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RFWD3Q6PCD5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
RFWD3Q6PCD5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD3Q6PCD5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.97■■□□□ 1.11
RFWD3Q6PCD5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 FAM99A-202ENST00000538190 1989 ntBASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD3Q6PCD5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
RFWD3Q6PCD5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 AC003102.1-202ENST00000563394 1796 ntBASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 AP001160.3-201ENST00000601484 763 ntBASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD3Q6PCD5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 RARRES2P11-201ENST00000635158 484 ntBASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD3Q6PCD5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 EEF1DP3-203ENST00000566025 782 ntBASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFWD3Q6PCD5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 AC010542.4-201ENST00000563151 1910 ntBASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RFWD3Q6PCD5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD3Q6PCD5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD3Q6PCD5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD3Q6PCD5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD3Q6PCD5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD3Q6PCD5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD3Q6PCD5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms