Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL54Q6P161 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL54Q6P161 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
MRPL54Q6P161 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL54Q6P161 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL54Q6P161 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL54Q6P161 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 RPS2P35-201ENST00000443417 897 ntBASIC15.9■□□□□ 0.14
MRPL54Q6P161 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MRPL54Q6P161 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL54Q6P161 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.14
MRPL54Q6P161 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
MRPL54Q6P161 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
MRPL54Q6P161 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPL54Q6P161 AL049796.1-201ENST00000565336 1766 ntBASIC15.89■□□□□ 0.13
MRPL54Q6P161 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPL54Q6P161 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MRPL54Q6P161 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPL54Q6P161 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL54Q6P161 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MRPL54Q6P161 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPL54Q6P161 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MRPL54Q6P161 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.88■□□□□ 0.13
MRPL54Q6P161 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.88■□□□□ 0.13
MRPL54Q6P161 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.88■□□□□ 0.13
MRPL54Q6P161 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
MRPL54Q6P161 LONRF2P2-201ENST00000439212 571 ntBASIC15.88■□□□□ 0.13
MRPL54Q6P161 SPCS2P3-201ENST00000500401 656 ntBASIC15.88■□□□□ 0.13
MRPL54Q6P161 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MRPL54Q6P161 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.88■□□□□ 0.13
MRPL54Q6P161 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
MRPL54Q6P161 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL54Q6P161 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL54Q6P161 AC090340.1-201ENST00000620778 4980 ntBASIC15.87■□□□□ 0.13
MRPL54Q6P161 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
MRPL54Q6P161 AC004687.1-201ENST00000579003 1625 ntBASIC15.86■□□□□ 0.13
MRPL54Q6P161 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms