Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF43Q68DV7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.06■■□□□ 1.12
RNF43Q68DV7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF43Q68DV7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF43Q68DV7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RNF43Q68DV7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
RNF43Q68DV7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF43Q68DV7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.06■■□□□ 1.12
RNF43Q68DV7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.06■■□□□ 1.12
RNF43Q68DV7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.06■■□□□ 1.12
RNF43Q68DV7 AL034346.1-201ENST00000568244 1277 ntBASIC22.06■■□□□ 1.12
RNF43Q68DV7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF43Q68DV7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF43Q68DV7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF43Q68DV7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF43Q68DV7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF43Q68DV7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF43Q68DV7 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.05■■□□□ 1.12
RNF43Q68DV7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF43Q68DV7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF43Q68DV7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF43Q68DV7 AL355802.2-201ENST00000402069 882 ntBASIC22.05■■□□□ 1.12
RNF43Q68DV7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF43Q68DV7 AC026185.1-201ENST00000445748 174 ntBASIC22.05■■□□□ 1.12
RNF43Q68DV7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF43Q68DV7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF43Q68DV7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF43Q68DV7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF43Q68DV7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
RNF43Q68DV7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 AP004607.7-201ENST00000527152 1677 ntBASIC22.04■■□□□ 1.12
RNF43Q68DV7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RNF43Q68DV7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF43Q68DV7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF43Q68DV7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RNF43Q68DV7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RNF43Q68DV7 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.04■■□□□ 1.12
RNF43Q68DV7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF43Q68DV7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF43Q68DV7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF43Q68DV7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF43Q68DV7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF43Q68DV7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF43Q68DV7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF43Q68DV7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF43Q68DV7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF43Q68DV7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF43Q68DV7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF43Q68DV7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF43Q68DV7 KRT87P-202ENST00000534226 1464 ntBASIC22.03■■□□□ 1.12
RNF43Q68DV7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF43Q68DV7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF43Q68DV7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF43Q68DV7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF43Q68DV7 AC006970.2-201ENST00000450065 779 ntBASIC22.02■■□□□ 1.12
RNF43Q68DV7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.02■■□□□ 1.12
RNF43Q68DV7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF43Q68DV7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF43Q68DV7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF43Q68DV7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF43Q68DV7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF43Q68DV7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RNF43Q68DV7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RNF43Q68DV7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RNF43Q68DV7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.11
RNF43Q68DV7 AC073130.3-201ENST00000624389 2278 ntBASIC22.01■■□□□ 1.11
RNF43Q68DV7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 KRT19P1-201ENST00000405746 1186 ntBASIC22.01■■□□□ 1.11
RNF43Q68DV7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 AL109923.1-201ENST00000618799 583 ntBASIC22.01■■□□□ 1.11
RNF43Q68DV7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF43Q68DV7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF43Q68DV7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF43Q68DV7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF43Q68DV7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF43Q68DV7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF43Q68DV7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22■■□□□ 1.11
RNF43Q68DV7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF43Q68DV7 AC080038.3-201ENST00000623346 1952 ntBASIC22■■□□□ 1.11
RNF43Q68DV7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF43Q68DV7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF43Q68DV7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22■■□□□ 1.11
RNF43Q68DV7 AP006587.3-201ENST00000525742 1516 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms