Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC11.46□□□□□ -0.57
RNF213Q63HN8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 AC092368.3-202ENST00000574180 1591 ntBASIC11.46□□□□□ -0.57
RNF213Q63HN8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.46□□□□□ -0.58
RNF213Q63HN8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC11.46□□□□□ -0.58
RNF213Q63HN8 AL162412.1-201ENST00000567129 965 ntBASIC11.46□□□□□ -0.58
RNF213Q63HN8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
RNF213Q63HN8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
RNF213Q63HN8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RNF213Q63HN8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RNF213Q63HN8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC11.46□□□□□ -0.58
RNF213Q63HN8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 FDX1P1-201ENST00000449115 551 ntBASIC11.45□□□□□ -0.58
RNF213Q63HN8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 AC139530.3-201ENST00000620344 690 ntBASIC11.45□□□□□ -0.58
RNF213Q63HN8 AC105020.6-201ENST00000621523 1217 ntBASIC11.45□□□□□ -0.58
RNF213Q63HN8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
RNF213Q63HN8 AC010947.1-201ENST00000623454 693 ntBASIC11.45□□□□□ -0.58
RNF213Q63HN8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RNF213Q63HN8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 AC133681.1-201ENST00000465482 601 ntBASIC11.44□□□□□ -0.58
RNF213Q63HN8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RNF213Q63HN8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 KRT17P1-201ENST00000399211 1546 ntBASIC11.44□□□□□ -0.58
RNF213Q63HN8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RNF213Q63HN8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RNF213Q63HN8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 OR2A1-AS1-207ENST00000486094 819 ntBASIC11.44□□□□□ -0.58
RNF213Q63HN8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RNF213Q63HN8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 AC138907.5-202ENST00000569484 235 ntBASIC11.44□□□□□ -0.58
RNF213Q63HN8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 LINC02084-201ENST00000606069 1096 ntBASIC11.44□□□□□ -0.58
RNF213Q63HN8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 LINC01568-207ENST00000641790 1380 ntBASIC11.44□□□□□ -0.58
RNF213Q63HN8 AC004687.1-201ENST00000579003 1625 ntBASIC11.44□□□□□ -0.58
RNF213Q63HN8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RNF213Q63HN8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RNF213Q63HN8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RNF213Q63HN8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RNF213Q63HN8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RNF213Q63HN8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RNF213Q63HN8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RNF213Q63HN8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RNF213Q63HN8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RNF213Q63HN8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC11.43□□□□□ -0.58
RNF213Q63HN8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RNF213Q63HN8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 MYC-208ENST00000641036 567 ntBASIC11.42□□□□□ -0.58
RNF213Q63HN8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RNF213Q63HN8 AP000525.1-201ENST00000608286 694 ntBASIC11.42□□□□□ -0.58
RNF213Q63HN8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RNF213Q63HN8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 AC239809.2-201ENST00000415381 517 ntBASIC11.42□□□□□ -0.58
RNF213Q63HN8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms