Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 AL359736.2-201ENST00000621992 437 ntBASIC26.88■■□□□ 1.89
RC3H1Q5TC82 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RC3H1Q5TC82 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 AC091799.1-201ENST00000422823 811 ntBASIC26.87■■□□□ 1.89
RC3H1Q5TC82 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 AC060766.5-201ENST00000590539 871 ntBASIC26.87■■□□□ 1.89
RC3H1Q5TC82 HLA-B-256ENST00000639848 1089 ntBASIC26.87■■□□□ 1.89
RC3H1Q5TC82 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.87■■□□□ 1.89
RC3H1Q5TC82 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 AL355472.2-201ENST00000422958 438 ntBASIC26.86■■□□□ 1.89
RC3H1Q5TC82 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 CYP2T3P-201ENST00000601990 817 ntBASIC26.86■■□□□ 1.89
RC3H1Q5TC82 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RC3H1Q5TC82 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.85■■□□□ 1.89
RC3H1Q5TC82 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RC3H1Q5TC82 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RC3H1Q5TC82 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
RC3H1Q5TC82 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.85■■□□□ 1.89
RC3H1Q5TC82 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RC3H1Q5TC82 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RC3H1Q5TC82 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RC3H1Q5TC82 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RC3H1Q5TC82 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
RC3H1Q5TC82 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.84■■□□□ 1.89
RC3H1Q5TC82 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RC3H1Q5TC82 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.84■■□□□ 1.89
RC3H1Q5TC82 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
RC3H1Q5TC82 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
RC3H1Q5TC82 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.83■■□□□ 1.89
RC3H1Q5TC82 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.83■■□□□ 1.89
RC3H1Q5TC82 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
RC3H1Q5TC82 AC139530.1-201ENST00000575312 1977 ntBASIC26.83■■□□□ 1.89
RC3H1Q5TC82 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RC3H1Q5TC82 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RC3H1Q5TC82 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.83■■□□□ 1.88
RC3H1Q5TC82 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.83■■□□□ 1.88
RC3H1Q5TC82 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H1Q5TC82 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
RC3H1Q5TC82 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
RC3H1Q5TC82 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RC3H1Q5TC82 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
RC3H1Q5TC82 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
RC3H1Q5TC82 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
RC3H1Q5TC82 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RC3H1Q5TC82 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.81■■□□□ 1.88
RC3H1Q5TC82 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RC3H1Q5TC82 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RC3H1Q5TC82 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RC3H1Q5TC82 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RC3H1Q5TC82 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.8■■□□□ 1.88
RC3H1Q5TC82 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.8■■□□□ 1.88
RC3H1Q5TC82 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.8■■□□□ 1.88
RC3H1Q5TC82 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
RC3H1Q5TC82 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 AC003102.1-202ENST00000563394 1796 ntBASIC26.79■■□□□ 1.88
RC3H1Q5TC82 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H1Q5TC82 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms