Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 AC104187.1-201ENST00000607510 612 ntBASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
LDLRAP1Q5SW96 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LDLRAP1Q5SW96 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 AC138907.5-202ENST00000569484 235 ntBASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 KRT18P61-201ENST00000585825 1298 ntBASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.94■□□□□ 0.94
LDLRAP1Q5SW96 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 PKD1P6-201ENST00000343738 4769 ntBASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDLRAP1Q5SW96 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.92■□□□□ 0.94
LDLRAP1Q5SW96 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 AC010141.2-201ENST00000452426 721 ntBASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.91■□□□□ 0.94
LDLRAP1Q5SW96 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms