Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 AC060766.5-201ENST00000590539 871 ntBASIC23.35■■□□□ 1.33
TRIM60Q495X7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM60Q495X7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM60Q495X7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM60Q495X7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM60Q495X7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM60Q495X7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.34■■□□□ 1.33
TRIM60Q495X7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM60Q495X7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM60Q495X7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM60Q495X7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM60Q495X7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM60Q495X7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM60Q495X7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM60Q495X7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
TRIM60Q495X7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
TRIM60Q495X7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM60Q495X7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TRIM60Q495X7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM60Q495X7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TRIM60Q495X7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIM60Q495X7 FAM210CP-201ENST00000445714 574 ntBASIC23.33■■□□□ 1.33
TRIM60Q495X7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
TRIM60Q495X7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM60Q495X7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM60Q495X7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM60Q495X7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM60Q495X7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.33■■□□□ 1.32
TRIM60Q495X7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM60Q495X7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM60Q495X7 AC211429.1-201ENST00000415277 523 ntBASIC23.32■■□□□ 1.32
TRIM60Q495X7 SNORA78-201ENST00000459373 127 ntBASIC23.32■■□□□ 1.32
TRIM60Q495X7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM60Q495X7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM60Q495X7 Z99916.2-201ENST00000604037 246 ntBASIC23.32■■□□□ 1.32
TRIM60Q495X7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM60Q495X7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM60Q495X7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM60Q495X7 AC061975.6-201ENST00000579045 1553 ntBASIC23.31■■□□□ 1.32
TRIM60Q495X7 AC092068.2-201ENST00000590491 1708 ntBASIC23.31■■□□□ 1.32
TRIM60Q495X7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM60Q495X7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM60Q495X7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIM60Q495X7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.31■■□□□ 1.32
TRIM60Q495X7 HLA-B-256ENST00000639848 1089 ntBASIC23.31■■□□□ 1.32
TRIM60Q495X7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM60Q495X7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
TRIM60Q495X7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM60Q495X7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM60Q495X7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM60Q495X7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM60Q495X7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM60Q495X7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM60Q495X7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
TRIM60Q495X7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TRIM60Q495X7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM60Q495X7 CYP2T3P-201ENST00000601990 817 ntBASIC23.3■■□□□ 1.32
TRIM60Q495X7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM60Q495X7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM60Q495X7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM60Q495X7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM60Q495X7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM60Q495X7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM60Q495X7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM60Q495X7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM60Q495X7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM60Q495X7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM60Q495X7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
TRIM60Q495X7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
TRIM60Q495X7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM60Q495X7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM60Q495X7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.29■■□□□ 1.32
TRIM60Q495X7 REXO1L12P-201ENST00000622156 912 ntBASIC23.29■■□□□ 1.32
TRIM60Q495X7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM60Q495X7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM60Q495X7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM60Q495X7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM60Q495X7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM60Q495X7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM60Q495X7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM60Q495X7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM60Q495X7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.28■■□□□ 1.32
TRIM60Q495X7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM60Q495X7 AC010331.1-201ENST00000611423 582 ntBASIC23.28■■□□□ 1.32
TRIM60Q495X7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM60Q495X7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM60Q495X7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM60Q495X7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TRIM60Q495X7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM60Q495X7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.27■■□□□ 1.32
TRIM60Q495X7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TRIM60Q495X7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM60Q495X7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.27■■□□□ 1.32
TRIM60Q495X7 AC233263.1-201ENST00000578059 224 ntBASIC23.27■■□□□ 1.32
TRIM60Q495X7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.27■■□□□ 1.32
TRIM60Q495X7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM60Q495X7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM60Q495X7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms