Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 AC092368.3-202ENST00000574180 1591 ntBASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 AL355472.2-201ENST00000422958 438 ntBASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 DUSP8P3-201ENST00000399571 1760 ntBASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 POU5F1P4-201ENST00000413175 1085 ntBASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO4Q2I0M5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 AC008175.2-201ENST00000612840 297 ntBASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RSPO4Q2I0M5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 AP004607.7-201ENST00000527152 1677 ntBASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 AL355075.4-201ENST00000554988 638 ntBASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 SOX15-203ENST00000570788 1093 ntBASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RSPO4Q2I0M5 RBM17P2-201ENST00000616397 1405 ntBASIC20.58■□□□□ 0.88
RSPO4Q2I0M5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RSPO4Q2I0M5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RSPO4Q2I0M5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 AL353803.4-201ENST00000565882 1934 ntBASIC20.57■□□□□ 0.88
RSPO4Q2I0M5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO4Q2I0M5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RSPO4Q2I0M5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RSPO4Q2I0M5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RSPO4Q2I0M5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.55■□□□□ 0.88
RSPO4Q2I0M5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.55■□□□□ 0.88
RSPO4Q2I0M5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RSPO4Q2I0M5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms