Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 RPL17BYJL177W 555 nt4.34□□□□□ -1.71
NPL3Q01560 YKL069WYKL069W 543 nt4.34□□□□□ -1.71
NPL3Q01560 YAR047CYAR047C 321 nt4.34□□□□□ -1.71
NPL3Q01560 NNT1YLR285W 786 nt4.34□□□□□ -1.71
NPL3Q01560 YPT7YML001W 627 nt4.34□□□□□ -1.71
NPL3Q01560 YMR158W-BYMR158W-B 321 nt4.34□□□□□ -1.71
NPL3Q01560 DDR48YMR173W 1293 nt4.34□□□□□ -1.71
NPL3Q01560 FMP23YBR047W 528 nt4.34□□□□□ -1.71
NPL3Q01560 YPR174CYPR174C 666 nt4.34□□□□□ -1.71 RIP-Chip
NPL3Q01560 YSY6YBR162W-A 198 nt4.34□□□□□ -1.71 RIP-Chip
NPL3Q01560 MDM34YGL219C 1380 nt4.34□□□□□ -1.71 RIP-Chip
NPL3Q01560 ASI3YNL008C 2031 nt4.34□□□□□ -1.71
NPL3Q01560 FAA1YOR317W 2103 nt4.34□□□□□ -1.71
NPL3Q01560 TSR1YDL060W 2367 nt4.34□□□□□ -1.72
NPL3Q01560 IMH1YLR309C 2736 nt4.34□□□□□ -1.72
NPL3Q01560 PSP1YDR505C 2526 nt4.33□□□□□ -1.72
NPL3Q01560 OLE1YGL055W 1533 nt4.33□□□□□ -1.72
NPL3Q01560 YPL278CYPL278C 303 nt4.33□□□□□ -1.72
NPL3Q01560 RPB5YBR154C 648 nt4.33□□□□□ -1.72 RIP-Chip
NPL3Q01560 RRN11YML043C 1524 nt4.32□□□□□ -1.72
NPL3Q01560 MNN1YER001W 2289 nt4.32□□□□□ -1.72
NPL3Q01560 HLR1YDR528W 1272 nt4.32□□□□□ -1.72
NPL3Q01560 YER181CYER181C 324 nt4.32□□□□□ -1.72
NPL3Q01560 YHR213WYHR213W 597 nt4.32□□□□□ -1.72
NPL3Q01560 SDL1YIL167W 633 nt4.32□□□□□ -1.72
NPL3Q01560 YAR062WYAR062W 597 nt4.32□□□□□ -1.72
NPL3Q01560 YMR001C-AYMR001C-A 231 nt4.32□□□□□ -1.72
NPL3Q01560 YMR193C-AYMR193C-A 387 nt4.32□□□□□ -1.72
NPL3Q01560 SWM2YNR004W 441 nt4.32□□□□□ -1.72
NPL3Q01560 MRPL40YPL173W 894 nt4.32□□□□□ -1.72
NPL3Q01560 SHG1YBR258C 429 nt4.32□□□□□ -1.72
NPL3Q01560 MIP6YHR015W 1980 nt4.32□□□□□ -1.72
NPL3Q01560 SYO1YDL063C 1863 nt4.32□□□□□ -1.72
NPL3Q01560 PRM15YMR278W 1869 nt4.32□□□□□ -1.72
NPL3Q01560 AZR1YGR224W 1842 nt4.32□□□□□ -1.72
NPL3Q01560 VPS45YGL095C 1734 nt4.32□□□□□ -1.72
NPL3Q01560 BUD5YCR038C 1929 nt4.31□□□□□ -1.72
NPL3Q01560 ASI1YMR119W 1875 nt4.31□□□□□ -1.72
NPL3Q01560 SSB1YDL229W 1842 nt4.31□□□□□ -1.72
NPL3Q01560 NTF2YER009W 378 nt4.31□□□□□ -1.72
NPL3Q01560 FAR7YFR008W 666 nt4.31□□□□□ -1.72
NPL3Q01560 CGR1YGL029W 363 nt4.31□□□□□ -1.72
NPL3Q01560 YGR228WYGR228W 345 nt4.31□□□□□ -1.72
NPL3Q01560 PAM18YLR008C 507 nt4.31□□□□□ -1.72 RIP-Chip
NPL3Q01560 YBR051WYBR051W 351 nt4.31□□□□□ -1.72
NPL3Q01560 YBR201C-AYBR201C-A 204 nt4.31□□□□□ -1.72
NPL3Q01560 NUP85YJR042W 2235 nt4.31□□□□□ -1.72
NPL3Q01560 NDC80YIL144W 2076 nt4.31□□□□□ -1.72
NPL3Q01560 CYM1YDR430C 2970 nt4.31□□□□□ -1.72
NPL3Q01560 AIM21YIR003W 2040 nt4.31□□□□□ -1.72
NPL3Q01560 LST4YKL176C 2487 nt4.31□□□□□ -1.72
NPL3Q01560 EXO70YJL085W 1872 nt4.3□□□□□ -1.72
NPL3Q01560 SEN1YLR430W 6696 nt4.3□□□□□ -1.72
NPL3Q01560 VPS9YML097C 1356 nt4.3□□□□□ -1.72
NPL3Q01560 snR7-SsnR7-S 179 nt4.3□□□□□ -1.72
NPL3Q01560 NCB2YDR397C 441 nt4.3□□□□□ -1.72 RIP-Chip
NPL3Q01560 YFL015CYFL015C 495 nt4.3□□□□□ -1.72
NPL3Q01560 SAE2YGL175C 1038 nt4.3□□□□□ -1.72
NPL3Q01560 SEC22YLR268W 645 nt4.3□□□□□ -1.72 RIP-Chip
NPL3Q01560 MRPL44YMR225C 297 nt4.3□□□□□ -1.72 RIP-Chip
NPL3Q01560 SWS2YNL081C 432 nt4.3□□□□□ -1.72 RIP-Chip
NPL3Q01560 YPL077CYPL077C 723 nt4.3□□□□□ -1.72 RIP-Chip
NPL3Q01560 CBP3YPL215W 1008 nt4.3□□□□□ -1.72
NPL3Q01560 DPB3YBR278W 606 nt4.3□□□□□ -1.72 RIP-Chip
NPL3Q01560 PBN1YCL052C 1251 nt4.3□□□□□ -1.72
NPL3Q01560 ERG11YHR007C 1593 nt4.3□□□□□ -1.72
NPL3Q01560 VHR1YIL056W 1923 nt4.29□□□□□ -1.72 RIP-Chip
NPL3Q01560 GDH2YDL215C 3279 nt4.29□□□□□ -1.72
NPL3Q01560 RPS18AYDR450W 441 nt4.29□□□□□ -1.72
NPL3Q01560 YER006C-AYER006C-A 318 nt4.29□□□□□ -1.72
NPL3Q01560 YJL119CYJL119C 324 nt4.29□□□□□ -1.72
NPL3Q01560 SEC66YBR171W 621 nt4.29□□□□□ -1.72
NPL3Q01560 YMR221CYMR221C 1515 nt4.29□□□□□ -1.72
NPL3Q01560 PIN4YBL051C 2007 nt4.29□□□□□ -1.72
NPL3Q01560 EBS1YDR206W 2655 nt4.28□□□□□ -1.72
NPL3Q01560 HDA2YDR295C 2025 nt4.28□□□□□ -1.72
NPL3Q01560 RPS29BYDL061C 171 nt4.28□□□□□ -1.72 RIP-Chip
NPL3Q01560 RPP1AYDL081C 321 nt4.28□□□□□ -1.72
NPL3Q01560 TDA2YER071C 381 nt4.28□□□□□ -1.72
NPL3Q01560 RPL16AYIL133C 600 nt4.28□□□□□ -1.72
NPL3Q01560 VPS63YLR261C 327 nt4.28□□□□□ -1.72
NPL3Q01560 BER1YLR412W 825 nt4.28□□□□□ -1.72 RIP-Chip
NPL3Q01560 PHO80YOL001W 882 nt4.28□□□□□ -1.72
NPL3Q01560 VID24YBR105C 1089 nt4.28□□□□□ -1.72
NPL3Q01560 YCL022CYCL022C 516 nt4.28□□□□□ -1.72
NPL3Q01560 MDM36YPR083W 1740 nt4.28□□□□□ -1.72
NPL3Q01560 FOX2YKR009C 2703 nt4.28□□□□□ -1.72 RIP-Chip
NPL3Q01560 SEC2YNL272C 2280 nt4.28□□□□□ -1.72
NPL3Q01560 ASM4YDL088C 1587 nt4.27□□□□□ -1.73
NPL3Q01560 YDR366CYDR366C 399 nt4.27□□□□□ -1.73
NPL3Q01560 VMA8YEL051W 771 nt4.27□□□□□ -1.73
NPL3Q01560 YGR161W-CYGR161W-C 279 nt4.27□□□□□ -1.73
NPL3Q01560 MTM1YGR257C 1101 nt4.27□□□□□ -1.73 RIP-Chip
NPL3Q01560 YKL063CYKL063C 504 nt4.27□□□□□ -1.73 RIP-Chip
NPL3Q01560 YLR101CYLR101C 396 nt4.27□□□□□ -1.73
NPL3Q01560 NKP2YLR315W 462 nt4.27□□□□□ -1.73
NPL3Q01560 RPL18BYNL301C 561 nt4.27□□□□□ -1.73 RIP-Chip
NPL3Q01560 YOR293C-AYOR293C-A 150 nt4.27□□□□□ -1.73
NPL3Q01560 YPL185WYPL185W 396 nt4.27□□□□□ -1.73
NPL3Q01560 SKG6YHR149C 2205 nt4.27□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms