Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 ERG9YHR190W 1335 nt3.3□□□□□ -1.88
RPA49Q01080 CIN1YOR349W 3045 nt3.3□□□□□ -1.88
RPA49Q01080 NKP1YDR383C 717 nt3.3□□□□□ -1.88
RPA49Q01080 COBQ0105 1158 nt3.3□□□□□ -1.88
RPA49Q01080 YGR107WYGR107W 450 nt3.3□□□□□ -1.88
RPA49Q01080 YKL065W-AYKL065W-A 222 nt3.3□□□□□ -1.88
RPA49Q01080 TEM1YML064C 738 nt3.3□□□□□ -1.88
RPA49Q01080 RRP36YOR287C 903 nt3.3□□□□□ -1.88
RPA49Q01080 NDC80YIL144W 2076 nt3.3□□□□□ -1.88
RPA49Q01080 RPN2YIL075C 2838 nt3.3□□□□□ -1.88
RPA49Q01080 DRS2YAL026C 4068 nt3.3□□□□□ -1.88
RPA49Q01080 VBA4YDR119W 2307 nt3.3□□□□□ -1.88
RPA49Q01080 UTP5YDR398W 1932 nt3.29□□□□□ -1.88
RPA49Q01080 YPD1YDL235C 504 nt3.29□□□□□ -1.88
RPA49Q01080 tF(GAA)DtF(GAA)D 73 nt3.29□□□□□ -1.88
RPA49Q01080 tF(GAA)NtF(GAA)N 73 nt3.29□□□□□ -1.88
RPA49Q01080 MFA1YDR461W 111 nt3.29□□□□□ -1.88
RPA49Q01080 YGR126WYGR126W 693 nt3.29□□□□□ -1.88
RPA49Q01080 DOG2YHR043C 741 nt3.29□□□□□ -1.88
RPA49Q01080 YKL156C-AYKL156C-A 117 nt3.29□□□□□ -1.88
RPA49Q01080 TSR4YOL022C 1227 nt3.29□□□□□ -1.88
RPA49Q01080 PEX1YKL197C 3132 nt3.29□□□□□ -1.88
RPA49Q01080 YGL176CYGL176C 1665 nt3.29□□□□□ -1.88
RPA49Q01080 PIG2YIL045W 1617 nt3.29□□□□□ -1.88
RPA49Q01080 YPS6YIR039C 1614 nt3.29□□□□□ -1.88
RPA49Q01080 SET1YHR119W 3243 nt3.29□□□□□ -1.88
RPA49Q01080 DSF2YBR007C 2211 nt3.28□□□□□ -1.88
RPA49Q01080 REG1YDR028C 3045 nt3.28□□□□□ -1.88
RPA49Q01080 YDL050CYDL050C 372 nt3.28□□□□□ -1.88
RPA49Q01080 tC(GCA)BtC(GCA)B 72 nt3.28□□□□□ -1.88
RPA49Q01080 tC(GCA)GtC(GCA)G 72 nt3.28□□□□□ -1.88
RPA49Q01080 tC(GCA)P1tC(GCA)P1 72 nt3.28□□□□□ -1.88
RPA49Q01080 tC(GCA)P2tC(GCA)P2 72 nt3.28□□□□□ -1.88
RPA49Q01080 YDR431WYDR431W 312 nt3.28□□□□□ -1.88
RPA49Q01080 MAM1YER106W 909 nt3.28□□□□□ -1.88
RPA49Q01080 SMX2YFL017W-A 234 nt3.28□□□□□ -1.88
RPA49Q01080 YGL214WYGL214W 486 nt3.28□□□□□ -1.88
RPA49Q01080 GPX1YKL026C 504 nt3.28□□□□□ -1.88
RPA49Q01080 YMR316C-AYMR316C-A 312 nt3.28□□□□□ -1.88
RPA49Q01080 TPT1YOL102C 693 nt3.28□□□□□ -1.88
RPA49Q01080 SYO1YDL063C 1863 nt3.28□□□□□ -1.88
RPA49Q01080 MSH2YOL090W 2895 nt3.28□□□□□ -1.88
RPA49Q01080 RNT1YMR239C 1416 nt3.27□□□□□ -1.89
RPA49Q01080 RAD5YLR032W 3510 nt3.27□□□□□ -1.89
RPA49Q01080 NSP1YJL041W 2472 nt3.27□□□□□ -1.89
RPA49Q01080 ATP16YDL004W 483 nt3.27□□□□□ -1.89
RPA49Q01080 HTB1YDR224C 396 nt3.27□□□□□ -1.89
RPA49Q01080 FMN1YDR236C 657 nt3.27□□□□□ -1.89
RPA49Q01080 YDR464C-AYDR464C-A 189 nt3.27□□□□□ -1.89
RPA49Q01080 SEC4YFL005W 648 nt3.27□□□□□ -1.89
RPA49Q01080 UPF3YGR072W 1164 nt3.27□□□□□ -1.89
RPA49Q01080 RPS23AYGR118W 438 nt3.27□□□□□ -1.89
RPA49Q01080 RPC25YKL144C 639 nt3.27□□□□□ -1.89
RPA49Q01080 PIR1YKL164C 1026 nt3.27□□□□□ -1.89
RPA49Q01080 SFH1YLR321C 1281 nt3.27□□□□□ -1.89
RPA49Q01080 YBL039W-BYBL039W-B 180 nt3.27□□□□□ -1.89
RPA49Q01080 YMR294W-AYMR294W-A 360 nt3.27□□□□□ -1.89
RPA49Q01080 RPS23BYPR132W 438 nt3.27□□□□□ -1.89
RPA49Q01080 BMS1YPL217C 3552 nt3.27□□□□□ -1.89
RPA49Q01080 Q0255Q0255 1419 nt3.27□□□□□ -1.89
RPA49Q01080 SEA4YBL104C 3117 nt3.26□□□□□ -1.89
RPA49Q01080 MYO5YMR109W 3660 nt3.26□□□□□ -1.89
RPA49Q01080 YJR030CYJR030C 2238 nt3.26□□□□□ -1.89
RPA49Q01080 RPL13AYDL082W 600 nt3.26□□□□□ -1.89
RPA49Q01080 ATC1YDR184C 885 nt3.26□□□□□ -1.89
RPA49Q01080 YFH7YFR007W 1062 nt3.26□□□□□ -1.89
RPA49Q01080 CTK2YJL006C 972 nt3.26□□□□□ -1.89
RPA49Q01080 RPL17AYKL180W 555 nt3.26□□□□□ -1.89
RPA49Q01080 YKT6YKL196C 603 nt3.26□□□□□ -1.89
RPA49Q01080 TVP18YMR071C 504 nt3.26□□□□□ -1.89
RPA49Q01080 YOL114CYOL114C 609 nt3.26□□□□□ -1.89
RPA49Q01080 SLM4YBR077C 489 nt3.26□□□□□ -1.89
RPA49Q01080 APD1YBR151W 951 nt3.26□□□□□ -1.89
RPA49Q01080 HBT1YDL223C 3141 nt3.26□□□□□ -1.89
RPA49Q01080 RPA190YOR341W 4995 nt3.26□□□□□ -1.89
RPA49Q01080 CHS2YBR038W 2892 nt3.26□□□□□ -1.89
RPA49Q01080 ENA2YDR039C 3276 nt3.26□□□□□ -1.89
RPA49Q01080 ENA1YDR040C 3276 nt3.26□□□□□ -1.89
RPA49Q01080 YBR259WYBR259W 2067 nt3.25□□□□□ -1.89
RPA49Q01080 ERP3YDL018C 678 nt3.25□□□□□ -1.89
RPA49Q01080 PEX10YDR265W 1014 nt3.25□□□□□ -1.89
RPA49Q01080 YFL065CYFL065C 309 nt3.25□□□□□ -1.89
RPA49Q01080 COX3Q0275 810 nt3.25□□□□□ -1.89
RPA49Q01080 RPS30AYLR287C-A 192 nt3.25□□□□□ -1.89
RPA49Q01080 SRL1YOR247W 633 nt3.25□□□□□ -1.89
RPA49Q01080 MAK5YBR142W 2322 nt3.25□□□□□ -1.89
RPA49Q01080 HFM1YGL251C 3564 nt3.24□□□□□ -1.89
RPA49Q01080 PPH3YDR075W 927 nt3.24□□□□□ -1.89
RPA49Q01080 YGR073CYGR073C 372 nt3.24□□□□□ -1.89
RPA49Q01080 PET54YGR222W 882 nt3.24□□□□□ -1.89
RPA49Q01080 APC9YLR102C 798 nt3.24□□□□□ -1.89
RPA49Q01080 SMD2YLR275W 333 nt3.24□□□□□ -1.89
RPA49Q01080 RPL13BYMR142C 600 nt3.24□□□□□ -1.89
RPA49Q01080 YBL068W-AYBL068W-A 237 nt3.24□□□□□ -1.89
RPA49Q01080 YNL276CYNL276C 396 nt3.24□□□□□ -1.89
RPA49Q01080 THI80YOR143C 960 nt3.24□□□□□ -1.89
RPA49Q01080 RFC5YBR087W 1065 nt3.24□□□□□ -1.89
RPA49Q01080 KAR4YCL055W 1008 nt3.24□□□□□ -1.89
RPA49Q01080 CST9YLR394W 1449 nt3.24□□□□□ -1.89
RPA49Q01080 YBP2YGL060W 1926 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 76.3 ms