Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.8■□□□□ 0.92
SRP54P61011 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
SRP54P61011 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SRP54P61011 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 TERF1P5-201ENST00000477545 1207 ntBASIC20.8■□□□□ 0.92
SRP54P61011 AC083906.2-201ENST00000511578 360 ntBASIC20.8■□□□□ 0.92
SRP54P61011 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.8■□□□□ 0.92
SRP54P61011 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.8■□□□□ 0.92
SRP54P61011 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.8■□□□□ 0.92
SRP54P61011 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SRP54P61011 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SRP54P61011 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.8■□□□□ 0.92
SRP54P61011 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SRP54P61011 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRP54P61011 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.79■□□□□ 0.92
SRP54P61011 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SRP54P61011 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRP54P61011 AL355802.2-201ENST00000402069 882 ntBASIC20.79■□□□□ 0.92
SRP54P61011 AC013268.1-206ENST00000638368 961 ntBASIC20.79■□□□□ 0.92
SRP54P61011 AC112229.1-201ENST00000639295 961 ntBASIC20.79■□□□□ 0.92
SRP54P61011 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRP54P61011 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SRP54P61011 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.79■□□□□ 0.92
SRP54P61011 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SRP54P61011 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
SRP54P61011 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRP54P61011 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRP54P61011 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRP54P61011 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SRP54P61011 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.78■□□□□ 0.92
SRP54P61011 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRP54P61011 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.78■□□□□ 0.92
SRP54P61011 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRP54P61011 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRP54P61011 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRP54P61011 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRP54P61011 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRP54P61011 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.77■□□□□ 0.92
SRP54P61011 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.77■□□□□ 0.92
SRP54P61011 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRP54P61011 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.77■□□□□ 0.92
SRP54P61011 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRP54P61011 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRP54P61011 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.77■□□□□ 0.92
SRP54P61011 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SRP54P61011 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SRP54P61011 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRP54P61011 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SRP54P61011 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SRP54P61011 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SRP54P61011 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRP54P61011 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.76■□□□□ 0.91
SRP54P61011 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRP54P61011 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRP54P61011 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.76■□□□□ 0.91
SRP54P61011 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.76■□□□□ 0.91
SRP54P61011 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRP54P61011 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SRP54P61011 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRP54P61011 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SRP54P61011 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRP54P61011 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SRP54P61011 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SRP54P61011 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRP54P61011 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SRP54P61011 PKD1P6-201ENST00000343738 4769 ntBASIC20.75■□□□□ 0.91
SRP54P61011 AC079834.2-201ENST00000609776 1949 ntBASIC20.75■□□□□ 0.91
SRP54P61011 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.75■□□□□ 0.91
SRP54P61011 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRP54P61011 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SRP54P61011 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRP54P61011 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.75■□□□□ 0.91
SRP54P61011 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
SRP54P61011 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.75■□□□□ 0.91
SRP54P61011 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.75■□□□□ 0.91
SRP54P61011 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SRP54P61011 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.75■□□□□ 0.91
SRP54P61011 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.75■□□□□ 0.91
SRP54P61011 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SRP54P61011 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SRP54P61011 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRP54P61011 AC026471.6-201ENST00000622954 1905 ntBASIC20.74■□□□□ 0.91
SRP54P61011 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.74■□□□□ 0.91
SRP54P61011 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.74■□□□□ 0.91
SRP54P61011 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.74■□□□□ 0.91
SRP54P61011 KRT16P2-201ENST00000414673 1423 ntBASIC20.74■□□□□ 0.91
SRP54P61011 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.74■□□□□ 0.91
SRP54P61011 TSPY6P-201ENST00000448518 926 ntBASIC20.74■□□□□ 0.91
SRP54P61011 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms