Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDC42P60953 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42P60953 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDC42P60953 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDC42P60953 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.24■□□□□ 0.67
CDC42P60953 GABARAPL3-202ENST00000624044 1851 ntBASIC19.24■□□□□ 0.67
CDC42P60953 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CDC42P60953 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42P60953 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42P60953 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42P60953 Z92544.1-202ENST00000571933 1220 ntBASIC19.24■□□□□ 0.67
CDC42P60953 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.24■□□□□ 0.67
CDC42P60953 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CDC42P60953 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
CDC42P60953 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.24■□□□□ 0.67
CDC42P60953 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDC42P60953 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDC42P60953 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42P60953 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
CDC42P60953 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
CDC42P60953 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC42P60953 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.23■□□□□ 0.67
CDC42P60953 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CDC42P60953 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 AL117332.1-201ENST00000622628 974 ntBASIC19.23■□□□□ 0.67
CDC42P60953 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42P60953 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDC42P60953 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC42P60953 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC42P60953 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42P60953 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42P60953 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC42P60953 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC42P60953 AC010997.5-201ENST00000609182 354 ntBASIC19.22■□□□□ 0.67
CDC42P60953 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42P60953 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42P60953 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42P60953 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42P60953 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42P60953 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDC42P60953 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42P60953 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42P60953 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42P60953 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDC42P60953 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42P60953 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CDC42P60953 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42P60953 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42P60953 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42P60953 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC42P60953 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42P60953 AC006128.1-201ENST00000624704 1661 ntBASIC19.2■□□□□ 0.66
CDC42P60953 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.2■□□□□ 0.66
CDC42P60953 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC42P60953 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.2■□□□□ 0.66
CDC42P60953 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CDC42P60953 pRNA.6-201ENST00000610482 90 ntBASIC19.2■□□□□ 0.66
CDC42P60953 pRNA.5-201ENST00000612139 90 ntBASIC19.2■□□□□ 0.66
CDC42P60953 pRNA.11-201ENST00000618423 90 ntBASIC19.2■□□□□ 0.66
CDC42P60953 pRNA.13-201ENST00000619112 90 ntBASIC19.2■□□□□ 0.66
CDC42P60953 AP005212.1-201ENST00000581547 1997 ntBASIC19.2■□□□□ 0.66
CDC42P60953 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42P60953 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CDC42P60953 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms