Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB38P57729 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB38P57729 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RAB38P57729 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB38P57729 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB38P57729 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB38P57729 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB38P57729 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB38P57729 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB38P57729 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB38P57729 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB38P57729 POU5F1P4-201ENST00000413175 1085 ntBASIC19.87■□□□□ 0.77
RAB38P57729 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB38P57729 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB38P57729 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB38P57729 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
RAB38P57729 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
RAB38P57729 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RAB38P57729 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB38P57729 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB38P57729 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RAB38P57729 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB38P57729 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.86■□□□□ 0.77
RAB38P57729 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB38P57729 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB38P57729 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB38P57729 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAB38P57729 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB38P57729 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB38P57729 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB38P57729 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB38P57729 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB38P57729 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB38P57729 KRT18P20-201ENST00000548986 1279 ntBASIC19.85■□□□□ 0.77
RAB38P57729 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RAB38P57729 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB38P57729 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB38P57729 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB38P57729 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB38P57729 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAB38P57729 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB38P57729 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB38P57729 AC137761.2-201ENST00000561729 223 ntBASIC19.84■□□□□ 0.77
RAB38P57729 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.84■□□□□ 0.77
RAB38P57729 AC145350.3-201ENST00000569033 163 ntBASIC19.84■□□□□ 0.77
RAB38P57729 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 AC120498.10-201ENST00000621827 505 ntBASIC19.84■□□□□ 0.77
RAB38P57729 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
RAB38P57729 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB38P57729 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAB38P57729 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB38P57729 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB38P57729 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB38P57729 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RAB38P57729 AC061975.6-201ENST00000579045 1553 ntBASIC19.83■□□□□ 0.77
RAB38P57729 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB38P57729 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB38P57729 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB38P57729 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB38P57729 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.83■□□□□ 0.77
RAB38P57729 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB38P57729 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.83■□□□□ 0.76
RAB38P57729 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB38P57729 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB38P57729 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.83■□□□□ 0.76
RAB38P57729 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB38P57729 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.83■□□□□ 0.76
RAB38P57729 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB38P57729 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB38P57729 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB38P57729 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB38P57729 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB38P57729 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB38P57729 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.82■□□□□ 0.76
RAB38P57729 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB38P57729 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB38P57729 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.82■□□□□ 0.76
RAB38P57729 AC022517.1-201ENST00000592429 346 ntBASIC19.82■□□□□ 0.76
RAB38P57729 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB38P57729 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB38P57729 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB38P57729 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms