Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.71■□□□□ 0.11
CMC4P56277 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.11
CMC4P56277 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 AC137761.2-201ENST00000561729 223 ntBASIC15.71■□□□□ 0.11
CMC4P56277 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.71■□□□□ 0.11
CMC4P56277 AC145350.3-201ENST00000569033 163 ntBASIC15.71■□□□□ 0.11
CMC4P56277 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.71■□□□□ 0.11
CMC4P56277 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.71■□□□□ 0.11
CMC4P56277 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CMC4P56277 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CMC4P56277 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CMC4P56277 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CMC4P56277 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CMC4P56277 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.7■□□□□ 0.1
CMC4P56277 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CMC4P56277 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CMC4P56277 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.7■□□□□ 0.1
CMC4P56277 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.7■□□□□ 0.1
CMC4P56277 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.7■□□□□ 0.1
CMC4P56277 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMC4P56277 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.7■□□□□ 0.1
CMC4P56277 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMC4P56277 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMC4P56277 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.69■□□□□ 0.1
CMC4P56277 KRT16P2-201ENST00000414673 1423 ntBASIC15.69■□□□□ 0.1
CMC4P56277 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMC4P56277 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMC4P56277 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMC4P56277 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.69■□□□□ 0.1
CMC4P56277 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.69■□□□□ 0.1
CMC4P56277 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMC4P56277 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CMC4P56277 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CMC4P56277 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CMC4P56277 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.68■□□□□ 0.1
CMC4P56277 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.68■□□□□ 0.1
CMC4P56277 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.68■□□□□ 0.1
CMC4P56277 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.68■□□□□ 0.1
CMC4P56277 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.68■□□□□ 0.1
CMC4P56277 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMC4P56277 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CMC4P56277 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CMC4P56277 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.67■□□□□ 0.1
CMC4P56277 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CMC4P56277 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CMC4P56277 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CMC4P56277 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CMC4P56277 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.67■□□□□ 0.1
CMC4P56277 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CMC4P56277 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CMC4P56277 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.67■□□□□ 0.1
CMC4P56277 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMC4P56277 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CMC4P56277 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.66■□□□□ 0.1
CMC4P56277 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.66■□□□□ 0.1
CMC4P56277 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.66■□□□□ 0.1
CMC4P56277 AC133561.1-201ENST00000568600 2415 ntBASIC15.66■□□□□ 0.1
CMC4P56277 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms