Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH11P55287 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH11P55287 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH11P55287 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH11P55287 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH11P55287 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH11P55287 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH11P55287 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH11P55287 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH11P55287 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH11P55287 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH11P55287 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDH11P55287 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDH11P55287 AC133637.1-201ENST00000624115 1537 ntBASIC19.23■□□□□ 0.67
CDH11P55287 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH11P55287 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH11P55287 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH11P55287 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH11P55287 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH11P55287 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH11P55287 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH11P55287 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH11P55287 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH11P55287 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH11P55287 SLC47A1P1-202ENST00000449666 945 ntBASIC19.22■□□□□ 0.67
CDH11P55287 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.22■□□□□ 0.67
CDH11P55287 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH11P55287 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH11P55287 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH11P55287 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH11P55287 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH11P55287 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH11P55287 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
CDH11P55287 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH11P55287 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDH11P55287 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH11P55287 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH11P55287 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDH11P55287 LINC01521-201ENST00000504184 1943 ntBASIC19.21■□□□□ 0.67
CDH11P55287 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH11P55287 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH11P55287 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH11P55287 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
CDH11P55287 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH11P55287 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH11P55287 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH11P55287 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH11P55287 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH11P55287 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDH11P55287 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH11P55287 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH11P55287 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH11P55287 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH11P55287 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH11P55287 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDH11P55287 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH11P55287 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH11P55287 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDH11P55287 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH11P55287 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH11P55287 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH11P55287 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH11P55287 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH11P55287 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CDH11P55287 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH11P55287 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH11P55287 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH11P55287 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH11P55287 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH11P55287 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDH11P55287 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH11P55287 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDH11P55287 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CDH11P55287 TSPY26P-201ENST00000476365 1326 ntBASIC19.18■□□□□ 0.66
CDH11P55287 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH11P55287 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH11P55287 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH11P55287 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH11P55287 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH11P55287 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH11P55287 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDH11P55287 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms