Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.18■■□□□ 1.3
NCKAP1LP55160 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NCKAP1LP55160 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.18■■□□□ 1.3
NCKAP1LP55160 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.18■■□□□ 1.3
NCKAP1LP55160 KRT18P20-201ENST00000548986 1279 ntBASIC23.18■■□□□ 1.3
NCKAP1LP55160 AC008175.2-201ENST00000612840 297 ntBASIC23.18■■□□□ 1.3
NCKAP1LP55160 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.18■■□□□ 1.3
NCKAP1LP55160 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
NCKAP1LP55160 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.18■■□□□ 1.3
NCKAP1LP55160 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1LP55160 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1LP55160 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.17■■□□□ 1.3
NCKAP1LP55160 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1LP55160 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1LP55160 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
NCKAP1LP55160 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1LP55160 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1LP55160 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.17■■□□□ 1.3
NCKAP1LP55160 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.17■■□□□ 1.3
NCKAP1LP55160 POU5F1P4-201ENST00000413175 1085 ntBASIC23.17■■□□□ 1.3
NCKAP1LP55160 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1LP55160 AC006015.1-201ENST00000429970 570 ntBASIC23.17■■□□□ 1.3
NCKAP1LP55160 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.17■■□□□ 1.3
NCKAP1LP55160 AC137761.2-201ENST00000561729 223 ntBASIC23.17■■□□□ 1.3
NCKAP1LP55160 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.17■■□□□ 1.3
NCKAP1LP55160 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.17■■□□□ 1.3
NCKAP1LP55160 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.17■■□□□ 1.3
NCKAP1LP55160 AC145350.3-201ENST00000569033 163 ntBASIC23.17■■□□□ 1.3
NCKAP1LP55160 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1LP55160 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1LP55160 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1LP55160 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1LP55160 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1LP55160 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.16■■□□□ 1.3
NCKAP1LP55160 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.16■■□□□ 1.3
NCKAP1LP55160 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1LP55160 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.16■■□□□ 1.3
NCKAP1LP55160 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
NCKAP1LP55160 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1LP55160 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1LP55160 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1LP55160 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1LP55160 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.15■■□□□ 1.3
NCKAP1LP55160 SLC7A5P2-201ENST00000553010 536 ntBASIC23.15■■□□□ 1.3
NCKAP1LP55160 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.15■■□□□ 1.3
NCKAP1LP55160 UBE2DNL-204ENST00000602536 740 ntBASIC23.15■■□□□ 1.3
NCKAP1LP55160 AC092437.1-201ENST00000624794 1048 ntBASIC23.15■■□□□ 1.3
NCKAP1LP55160 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NCKAP1LP55160 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.15■■□□□ 1.3
NCKAP1LP55160 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1LP55160 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1LP55160 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1LP55160 Z98882.1-201ENST00000622160 2253 ntBASIC23.15■■□□□ 1.3
NCKAP1LP55160 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1LP55160 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1LP55160 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1LP55160 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NCKAP1LP55160 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
NCKAP1LP55160 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.14■■□□□ 1.29
NCKAP1LP55160 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NCKAP1LP55160 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.14■■□□□ 1.29
NCKAP1LP55160 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.14■■□□□ 1.29
NCKAP1LP55160 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NCKAP1LP55160 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NCKAP1LP55160 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCKAP1LP55160 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 IKBKGP1-201ENST00000612193 1073 ntBASIC23.13■■□□□ 1.29
NCKAP1LP55160 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.13■■□□□ 1.29
NCKAP1LP55160 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1LP55160 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1LP55160 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.12■■□□□ 1.29
NCKAP1LP55160 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1LP55160 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1LP55160 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1LP55160 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1LP55160 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1LP55160 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.12■■□□□ 1.29
NCKAP1LP55160 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1LP55160 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
NCKAP1LP55160 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
NCKAP1LP55160 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
NCKAP1LP55160 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NCKAP1LP55160 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms