Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 SLC7A5P1-201ENST00000568957 537 ntBASIC20.47■□□□□ 0.87
PDX1P52945 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 AC087742.1-201ENST00000575880 1738 ntBASIC20.47■□□□□ 0.87
PDX1P52945 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 AC127496.7-201ENST00000625110 1798 ntBASIC20.46■□□□□ 0.87
PDX1P52945 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PDX1P52945 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 TERF1P5-201ENST00000477545 1207 ntBASIC20.46■□□□□ 0.87
PDX1P52945 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.46■□□□□ 0.87
PDX1P52945 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.46■□□□□ 0.87
PDX1P52945 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PDX1P52945 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.46■□□□□ 0.87
PDX1P52945 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.46■□□□□ 0.87
PDX1P52945 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PDX1P52945 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDX1P52945 AC068338.2-201ENST00000563278 1430 ntBASIC20.45■□□□□ 0.86
PDX1P52945 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.45■□□□□ 0.86
PDX1P52945 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDX1P52945 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDX1P52945 ECEL1P1-201ENST00000373592 1742 ntBASIC20.45■□□□□ 0.86
PDX1P52945 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.45■□□□□ 0.86
PDX1P52945 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDX1P52945 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.45■□□□□ 0.86
PDX1P52945 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.45■□□□□ 0.86
PDX1P52945 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDX1P52945 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDX1P52945 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDX1P52945 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDX1P52945 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.45■□□□□ 0.86
PDX1P52945 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PDX1P52945 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.45■□□□□ 0.86
PDX1P52945 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDX1P52945 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.45■□□□□ 0.86
PDX1P52945 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDX1P52945 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
PDX1P52945 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
PDX1P52945 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PDX1P52945 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.44■□□□□ 0.86
PDX1P52945 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 AL034346.1-201ENST00000568244 1277 ntBASIC20.44■□□□□ 0.86
PDX1P52945 AC053503.5-201ENST00000601508 636 ntBASIC20.44■□□□□ 0.86
PDX1P52945 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.44■□□□□ 0.86
PDX1P52945 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PDX1P52945 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDX1P52945 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.44■□□□□ 0.86
PDX1P52945 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PDX1P52945 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDX1P52945 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDX1P52945 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDX1P52945 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDX1P52945 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.43■□□□□ 0.86
PDX1P52945 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDX1P52945 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.43■□□□□ 0.86
PDX1P52945 AC007322.4-201ENST00000509611 723 ntBASIC20.43■□□□□ 0.86
PDX1P52945 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.43■□□□□ 0.86
PDX1P52945 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.43■□□□□ 0.86
PDX1P52945 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.43■□□□□ 0.86
PDX1P52945 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.43■□□□□ 0.86
PDX1P52945 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDX1P52945 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
PDX1P52945 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.43■□□□□ 0.86
PDX1P52945 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDX1P52945 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.43■□□□□ 0.86
PDX1P52945 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.43■□□□□ 0.86
PDX1P52945 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.43■□□□□ 0.86
PDX1P52945 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.43■□□□□ 0.86
PDX1P52945 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDX1P52945 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PDX1P52945 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDX1P52945 AC242852.2-201ENST00000615738 1807 ntBASIC20.42■□□□□ 0.86
PDX1P52945 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDX1P52945 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDX1P52945 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.42■□□□□ 0.86
PDX1P52945 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.42■□□□□ 0.86
PDX1P52945 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
PDX1P52945 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PDX1P52945 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDX1P52945 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDX1P52945 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDX1P52945 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms