Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMSP52788 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMSP52788 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMSP52788 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.68■□□□□ 0.74
SMSP52788 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMSP52788 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.68■□□□□ 0.74
SMSP52788 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SMSP52788 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMSP52788 AC005229.4-201ENST00000610085 2198 ntBASIC19.68■□□□□ 0.74
SMSP52788 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMSP52788 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMSP52788 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SMSP52788 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMSP52788 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SMSP52788 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMSP52788 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMSP52788 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMSP52788 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMSP52788 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMSP52788 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.68■□□□□ 0.74
SMSP52788 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
SMSP52788 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.68■□□□□ 0.74
SMSP52788 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMSP52788 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMSP52788 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMSP52788 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.67■□□□□ 0.74
SMSP52788 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMSP52788 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.67■□□□□ 0.74
SMSP52788 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMSP52788 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.67■□□□□ 0.74
SMSP52788 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.67■□□□□ 0.74
SMSP52788 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SMSP52788 HLA-L-209ENST00000420110 1011 ntBASIC19.67■□□□□ 0.74
SMSP52788 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.67■□□□□ 0.74
SMSP52788 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.67■□□□□ 0.74
SMSP52788 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMSP52788 AC080038.1-201ENST00000611274 1154 ntBASIC19.67■□□□□ 0.74
SMSP52788 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMSP52788 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMSP52788 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.67■□□□□ 0.74
SMSP52788 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMSP52788 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.66■□□□□ 0.74
SMSP52788 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
SMSP52788 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMSP52788 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMSP52788 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMSP52788 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.66■□□□□ 0.74
SMSP52788 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.66■□□□□ 0.74
SMSP52788 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.66■□□□□ 0.74
SMSP52788 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SMSP52788 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMSP52788 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMSP52788 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMSP52788 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.65■□□□□ 0.74
SMSP52788 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.65■□□□□ 0.74
SMSP52788 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.65■□□□□ 0.74
SMSP52788 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 AC137761.2-201ENST00000561729 223 ntBASIC19.65■□□□□ 0.74
SMSP52788 AC145350.3-201ENST00000569033 163 ntBASIC19.65■□□□□ 0.74
SMSP52788 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.65■□□□□ 0.74
SMSP52788 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMSP52788 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMSP52788 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SMSP52788 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.64■□□□□ 0.73
SMSP52788 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMSP52788 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMSP52788 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SMSP52788 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.64■□□□□ 0.73
SMSP52788 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SMSP52788 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SMSP52788 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMSP52788 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SMSP52788 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMSP52788 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.64■□□□□ 0.73
SMSP52788 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMSP52788 SLC25A24-204ENST00000569674 2357 ntBASIC19.63■□□□□ 0.73
SMSP52788 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMSP52788 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMSP52788 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMSP52788 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMSP52788 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMSP52788 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.63■□□□□ 0.73
SMSP52788 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.63■□□□□ 0.73
SMSP52788 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.63■□□□□ 0.73
SMSP52788 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.63■□□□□ 0.73
SMSP52788 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.63■□□□□ 0.73
SMSP52788 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.63■□□□□ 0.73
SMSP52788 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SMSP52788 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMSP52788 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMSP52788 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMSP52788 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.62■□□□□ 0.73
SMSP52788 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms