Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2AP49459 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2AP49459 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.34□□□□□ -0.27
UBE2AP49459 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
UBE2AP49459 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
UBE2AP49459 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2AP49459 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2AP49459 AC007375.3-201ENST00000600936 2314 ntBASIC13.34□□□□□ -0.27
UBE2AP49459 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBE2AP49459 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.33□□□□□ -0.27
UBE2AP49459 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC13.33□□□□□ -0.28
UBE2AP49459 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UBE2AP49459 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.33□□□□□ -0.28
UBE2AP49459 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC13.33□□□□□ -0.28
UBE2AP49459 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
UBE2AP49459 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC13.33□□□□□ -0.28
UBE2AP49459 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.33□□□□□ -0.28
UBE2AP49459 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
UBE2AP49459 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
UBE2AP49459 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
UBE2AP49459 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBE2AP49459 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC13.32□□□□□ -0.28
UBE2AP49459 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.32□□□□□ -0.28
UBE2AP49459 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
UBE2AP49459 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UBE2AP49459 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.32□□□□□ -0.28
UBE2AP49459 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.32□□□□□ -0.28
UBE2AP49459 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UBE2AP49459 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.32□□□□□ -0.28
UBE2AP49459 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 AC010525.1-201ENST00000585559 441 ntBASIC13.32□□□□□ -0.28
UBE2AP49459 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UBE2AP49459 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
UBE2AP49459 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UBE2AP49459 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2AP49459 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2AP49459 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
UBE2AP49459 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2AP49459 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UBE2AP49459 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 FAM99A-202ENST00000538190 1989 ntBASIC13.31□□□□□ -0.28
UBE2AP49459 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UBE2AP49459 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2AP49459 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UBE2AP49459 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.31□□□□□ -0.28
UBE2AP49459 AL034346.1-201ENST00000568244 1277 ntBASIC13.31□□□□□ -0.28
UBE2AP49459 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2AP49459 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2AP49459 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2AP49459 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UBE2AP49459 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2AP49459 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2AP49459 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
UBE2AP49459 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
UBE2AP49459 OXCT2P1-201ENST00000447263 1535 ntBASIC13.3□□□□□ -0.28
UBE2AP49459 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
UBE2AP49459 UNC93B3-201ENST00000308076 687 ntBASIC13.3□□□□□ -0.28
UBE2AP49459 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms