Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.03■□□□□ 0.96
RXRGP48443 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRGP48443 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRGP48443 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRGP48443 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
RXRGP48443 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.02■□□□□ 0.96
RXRGP48443 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RXRGP48443 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRGP48443 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRGP48443 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.02■□□□□ 0.96
RXRGP48443 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRGP48443 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.02■□□□□ 0.96
RXRGP48443 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RXRGP48443 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.02■□□□□ 0.96
RXRGP48443 SLC7A5P1-201ENST00000568957 537 ntBASIC21.02■□□□□ 0.96
RXRGP48443 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.02■□□□□ 0.96
RXRGP48443 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.02■□□□□ 0.96
RXRGP48443 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRGP48443 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RXRGP48443 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RXRGP48443 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RXRGP48443 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRGP48443 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.01■□□□□ 0.95
RXRGP48443 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRGP48443 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.01■□□□□ 0.95
RXRGP48443 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RXRGP48443 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RXRGP48443 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRGP48443 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.01■□□□□ 0.95
RXRGP48443 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.01■□□□□ 0.95
RXRGP48443 AC133552.2-202ENST00000575694 574 ntBASIC21.01■□□□□ 0.95
RXRGP48443 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.01■□□□□ 0.95
RXRGP48443 AC010536.3-201ENST00000620306 533 ntBASIC21.01■□□□□ 0.95
RXRGP48443 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RXRGP48443 OR7E47P-201ENST00000546390 1422 ntBASIC21.01■□□□□ 0.95
RXRGP48443 EP400NL-214ENST00000641289 2402 ntBASIC21■□□□□ 0.95
RXRGP48443 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21■□□□□ 0.95
RXRGP48443 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RXRGP48443 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RXRGP48443 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21■□□□□ 0.95
RXRGP48443 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21■□□□□ 0.95
RXRGP48443 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21■□□□□ 0.95
RXRGP48443 SLC29A4P1-201ENST00000398760 971 ntBASIC21■□□□□ 0.95
RXRGP48443 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RXRGP48443 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21■□□□□ 0.95
RXRGP48443 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21■□□□□ 0.95
RXRGP48443 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RXRGP48443 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21■□□□□ 0.95
RXRGP48443 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RXRGP48443 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.99■□□□□ 0.95
RXRGP48443 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RXRGP48443 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RXRGP48443 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RXRGP48443 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.99■□□□□ 0.95
RXRGP48443 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RXRGP48443 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RXRGP48443 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RXRGP48443 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RXRGP48443 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RXRGP48443 AF201337.1-201ENST00000520239 748 ntBASIC20.99■□□□□ 0.95
RXRGP48443 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RXRGP48443 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRGP48443 KRT18P6-201ENST00000555540 1265 ntBASIC20.99■□□□□ 0.95
RXRGP48443 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.99■□□□□ 0.95
RXRGP48443 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.99■□□□□ 0.95
RXRGP48443 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RXRGP48443 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RXRGP48443 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRGP48443 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRGP48443 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RXRGP48443 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.98■□□□□ 0.95
RXRGP48443 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
RXRGP48443 AC073210.2-201ENST00000430369 194 ntBASIC20.98■□□□□ 0.95
RXRGP48443 AL138781.1-201ENST00000566567 1274 ntBASIC20.98■□□□□ 0.95
RXRGP48443 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRGP48443 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RXRGP48443 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.97■□□□□ 0.95
RXRGP48443 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.97■□□□□ 0.95
RXRGP48443 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RXRGP48443 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.97■□□□□ 0.95
RXRGP48443 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.97■□□□□ 0.95
RXRGP48443 EEF1DP3-203ENST00000566025 782 ntBASIC20.97■□□□□ 0.95
RXRGP48443 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RXRGP48443 AC137767.1-201ENST00000602918 1920 ntBASIC20.97■□□□□ 0.95
RXRGP48443 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms