Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PTPN6P29350 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN6P29350 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN6P29350 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20■□□□□ 0.79
PTPN6P29350 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
PTPN6P29350 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN6P29350 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 MIR935-201ENST00000401179 91 ntBASIC19.99■□□□□ 0.79
PTPN6P29350 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN6P29350 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPN6P29350 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN6P29350 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PTPN6P29350 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PTPN6P29350 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 IRS3P-201ENST00000223076 1006 ntBASIC19.98■□□□□ 0.79
PTPN6P29350 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPN6P29350 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPN6P29350 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PTPN6P29350 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PTPN6P29350 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN6P29350 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN6P29350 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PTPN6P29350 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
PTPN6P29350 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PTPN6P29350 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN6P29350 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
PTPN6P29350 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN6P29350 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN6P29350 LINC01521-201ENST00000504184 1943 ntBASIC19.96■□□□□ 0.79
PTPN6P29350 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PTPN6P29350 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PTPN6P29350 SMUG1P1-201ENST00000590640 811 ntBASIC19.96■□□□□ 0.79
PTPN6P29350 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN6P29350 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PTPN6P29350 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPN6P29350 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN6P29350 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN6P29350 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
PTPN6P29350 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN6P29350 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPN6P29350 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
PTPN6P29350 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN6P29350 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN6P29350 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PTPN6P29350 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN6P29350 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN6P29350 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN6P29350 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN6P29350 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN6P29350 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN6P29350 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN6P29350 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN6P29350 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PTPN6P29350 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.94■□□□□ 0.78
PTPN6P29350 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN6P29350 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PTPN6P29350 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN6P29350 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.94■□□□□ 0.78
PTPN6P29350 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN6P29350 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN6P29350 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms