Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.65■□□□□ 0.9
VARSP26640 YBX1P1-201ENST00000445822 960 ntBASIC20.65■□□□□ 0.9
VARSP26640 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARSP26640 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.65■□□□□ 0.9
VARSP26640 AC090192.1-201ENST00000517740 490 ntBASIC20.65■□□□□ 0.9
VARSP26640 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARSP26640 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
VARSP26640 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARSP26640 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VARSP26640 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VARSP26640 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARSP26640 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
VARSP26640 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VARSP26640 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VARSP26640 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.64■□□□□ 0.89
VARSP26640 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.64■□□□□ 0.89
VARSP26640 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.64■□□□□ 0.89
VARSP26640 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.64■□□□□ 0.89
VARSP26640 AL034346.1-201ENST00000568244 1277 ntBASIC20.64■□□□□ 0.89
VARSP26640 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.64■□□□□ 0.89
VARSP26640 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
VARSP26640 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARSP26640 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VARSP26640 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VARSP26640 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VARSP26640 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.63■□□□□ 0.89
VARSP26640 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VARSP26640 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VARSP26640 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VARSP26640 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VARSP26640 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VARSP26640 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.63■□□□□ 0.89
VARSP26640 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.63■□□□□ 0.89
VARSP26640 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.63■□□□□ 0.89
VARSP26640 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VARSP26640 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.63■□□□□ 0.89
VARSP26640 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VARSP26640 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARSP26640 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARSP26640 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.62■□□□□ 0.89
VARSP26640 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARSP26640 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.62■□□□□ 0.89
VARSP26640 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VARSP26640 AC022517.1-201ENST00000592429 346 ntBASIC20.62■□□□□ 0.89
VARSP26640 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.62■□□□□ 0.89
VARSP26640 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.62■□□□□ 0.89
VARSP26640 AL358852.1-201ENST00000623174 1268 ntBASIC20.62■□□□□ 0.89
VARSP26640 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VARSP26640 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.62■□□□□ 0.89
VARSP26640 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARSP26640 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.62■□□□□ 0.89
VARSP26640 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.61■□□□□ 0.89
VARSP26640 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.61■□□□□ 0.89
VARSP26640 AC005229.4-201ENST00000610085 2198 ntBASIC20.61■□□□□ 0.89
VARSP26640 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.61■□□□□ 0.89
VARSP26640 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
VARSP26640 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.61■□□□□ 0.89
VARSP26640 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.61■□□□□ 0.89
VARSP26640 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
VARSP26640 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARSP26640 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARSP26640 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VARSP26640 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
VARSP26640 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
VARSP26640 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.6■□□□□ 0.89
VARSP26640 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARSP26640 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARSP26640 AC123595.1-201ENST00000440769 1046 ntBASIC20.6■□□□□ 0.89
VARSP26640 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.6■□□□□ 0.89
VARSP26640 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.6■□□□□ 0.89
VARSP26640 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.6■□□□□ 0.89
VARSP26640 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.6■□□□□ 0.89
VARSP26640 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARSP26640 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
VARSP26640 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARSP26640 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARSP26640 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARSP26640 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARSP26640 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARSP26640 AP006587.3-201ENST00000525742 1516 ntBASIC20.59■□□□□ 0.89
VARSP26640 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.59■□□□□ 0.89
VARSP26640 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms