Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.72■□□□□ 0.43
LMO1P25800 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.72■□□□□ 0.43
LMO1P25800 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 MIR638-201ENST00000385237 100 ntBASIC17.72■□□□□ 0.43
LMO1P25800 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.72■□□□□ 0.43
LMO1P25800 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.72■□□□□ 0.43
LMO1P25800 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.72■□□□□ 0.43
LMO1P25800 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.72■□□□□ 0.43
LMO1P25800 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.72■□□□□ 0.43
LMO1P25800 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.72■□□□□ 0.43
LMO1P25800 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.72■□□□□ 0.43
LMO1P25800 AC142381.2-201ENST00000566120 298 ntBASIC17.72■□□□□ 0.43
LMO1P25800 AC005837.3-201ENST00000612163 286 ntBASIC17.72■□□□□ 0.43
LMO1P25800 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LMO1P25800 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO1P25800 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.72■□□□□ 0.43
LMO1P25800 AC005229.4-201ENST00000610085 2198 ntBASIC17.72■□□□□ 0.43
LMO1P25800 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO1P25800 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LMO1P25800 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO1P25800 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO1P25800 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.71■□□□□ 0.43
LMO1P25800 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO1P25800 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.71■□□□□ 0.43
LMO1P25800 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LMO1P25800 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LMO1P25800 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO1P25800 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.71■□□□□ 0.43
LMO1P25800 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO1P25800 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO1P25800 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LMO1P25800 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.71■□□□□ 0.42
LMO1P25800 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.71■□□□□ 0.42
LMO1P25800 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LMO1P25800 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.71■□□□□ 0.42
LMO1P25800 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO1P25800 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO1P25800 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LMO1P25800 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.7■□□□□ 0.42
LMO1P25800 AL358852.1-201ENST00000623174 1268 ntBASIC17.7■□□□□ 0.42
LMO1P25800 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO1P25800 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
LMO1P25800 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO1P25800 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO1P25800 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO1P25800 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.69■□□□□ 0.42
LMO1P25800 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.69■□□□□ 0.42
LMO1P25800 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.69■□□□□ 0.42
LMO1P25800 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.69■□□□□ 0.42
LMO1P25800 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.69■□□□□ 0.42
LMO1P25800 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LMO1P25800 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.69■□□□□ 0.42
LMO1P25800 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 RNF165-205ENST00000588679 2904 ntBASIC17.69■□□□□ 0.42
LMO1P25800 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LMO1P25800 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO1P25800 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LMO1P25800 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.68■□□□□ 0.42
LMO1P25800 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.68■□□□□ 0.42
LMO1P25800 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.68■□□□□ 0.42
LMO1P25800 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.68■□□□□ 0.42
LMO1P25800 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.68■□□□□ 0.42
LMO1P25800 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.68■□□□□ 0.42
LMO1P25800 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.68■□□□□ 0.42
LMO1P25800 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LMO1P25800 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO1P25800 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.67■□□□□ 0.42
LMO1P25800 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms