Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YGR117CYGR117C 1431 nt1.92□□□□□ -2.1
CDC39P25655 LSM8YJR022W 330 nt1.91□□□□□ -2.1
CDC39P25655 RAS1YOR101W 930 nt1.91□□□□□ -2.1
CDC39P25655 MPD1YOR288C 957 nt1.91□□□□□ -2.1
CDC39P25655 HSH49YOR319W 642 nt1.91□□□□□ -2.1
CDC39P25655 MGA1YGR249W 1371 nt1.91□□□□□ -2.1
CDC39P25655 SAP185YJL098W 3177 nt1.91□□□□□ -2.1
CDC39P25655 RPL17BYJL177W 555 nt1.91□□□□□ -2.1
CDC39P25655 YLL047WYLL047W 384 nt1.91□□□□□ -2.1
CDC39P25655 VBA4YDR119W 2307 nt1.91□□□□□ -2.1
CDC39P25655 YDR034C-DYDR034C-D 5313 nt1.9□□□□□ -2.1
CDC39P25655 YEF3YLR249W 3135 nt1.9□□□□□ -2.1
CDC39P25655 GPI8YDR331W 1236 nt1.9□□□□□ -2.1
CDC39P25655 YJL052C-AYJL052C-A 120 nt1.9□□□□□ -2.1
CDC39P25655 YKR075CYKR075C 924 nt1.9□□□□□ -2.1
CDC39P25655 PBA1YLR199C 831 nt1.9□□□□□ -2.1
CDC39P25655 FPR1YNL135C 345 nt1.9□□□□□ -2.1
CDC39P25655 DNL4YOR005C 2835 nt1.9□□□□□ -2.11
CDC39P25655 NUM1YDR150W 8247 nt1.9□□□□□ -2.11
CDC39P25655 STE24YJR117W 1362 nt1.9□□□□□ -2.11
CDC39P25655 TOM70YNL121C 1854 nt1.9□□□□□ -2.11
CDC39P25655 VMA8YEL051W 771 nt1.9□□□□□ -2.11
CDC39P25655 TTI2YJR136C 1266 nt1.9□□□□□ -2.11
CDC39P25655 GYL1YMR192W 2163 nt1.9□□□□□ -2.11
CDC39P25655 HRD1YOL013C 1656 nt1.9□□□□□ -2.11
CDC39P25655 VPS3YDR495C 3036 nt1.89□□□□□ -2.11
CDC39P25655 AI5_BETAQ0075 1065 nt1.89□□□□□ -2.11
CDC39P25655 RPN4YDL020C 1596 nt1.89□□□□□ -2.11
CDC39P25655 NFI1YOR156C 2181 nt1.89□□□□□ -2.11
CDC39P25655 SRB8YCR081W 4284 nt1.89□□□□□ -2.11
CDC39P25655 NFT1YKR103W 3657 nt1.89□□□□□ -2.11
CDC39P25655 REG1YDR028C 3045 nt1.88□□□□□ -2.11
CDC39P25655 IMG2YCR071C 441 nt1.88□□□□□ -2.11
CDC39P25655 MSS2YDL107W 1056 nt1.88□□□□□ -2.11
CDC39P25655 PHO92YDR374C 921 nt1.88□□□□□ -2.11
CDC39P25655 YDR535CYDR535C 501 nt1.88□□□□□ -2.11
CDC39P25655 GPP2YER062C 753 nt1.88□□□□□ -2.11
CDC39P25655 YIL024CYIL024C 570 nt1.88□□□□□ -2.11
CDC39P25655 YLR302CYLR302C 363 nt1.88□□□□□ -2.11
CDC39P25655 YPR203WYPR203W 309 nt1.88□□□□□ -2.11
CDC39P25655 SLH1YGR271W 5904 nt1.88□□□□□ -2.11
CDC39P25655 YGR273CYGR273C 525 nt1.88□□□□□ -2.11
CDC39P25655 RPL25YOL127W 429 nt1.88□□□□□ -2.11
CDC39P25655 YOL159C-AYOL159C-A 273 nt1.88□□□□□ -2.11
CDC39P25655 ATP22YDR350C 2055 nt1.88□□□□□ -2.11
CDC39P25655 MGR3YMR115W 1506 nt1.88□□□□□ -2.11
CDC39P25655 BRE1YDL074C 2103 nt1.88□□□□□ -2.11
CDC39P25655 SMC6YLR383W 3345 nt1.88□□□□□ -2.11
CDC39P25655 CLC1YGR167W 702 nt1.87□□□□□ -2.11
CDC39P25655 YAL059C-AYAL059C-A 423 nt1.87□□□□□ -2.11
CDC39P25655 REC102YLR329W 795 nt1.87□□□□□ -2.11
CDC39P25655 JSN1YJR091C 3276 nt1.87□□□□□ -2.11
CDC39P25655 HSC82YMR186W 2118 nt1.87□□□□□ -2.11
CDC39P25655 MUM3YOR298W 1440 nt1.87□□□□□ -2.11
CDC39P25655 YRR1YOR162C 2433 nt1.87□□□□□ -2.11
CDC39P25655 YDR209CYDR209C 414 nt1.87□□□□□ -2.11
CDC39P25655 BUR6YER159C 429 nt1.87□□□□□ -2.11
CDC39P25655 EMC2YJR088C 879 nt1.87□□□□□ -2.11
CDC39P25655 YLR076CYLR076C 423 nt1.87□□□□□ -2.11
CDC39P25655 RFC5YBR087W 1065 nt1.87□□□□□ -2.11
CDC39P25655 PUT3YKL015W 2940 nt1.86□□□□□ -2.11
CDC39P25655 PUS9YDL036C 1389 nt1.86□□□□□ -2.11
CDC39P25655 YCG1YDR325W 3108 nt1.86□□□□□ -2.11
CDC39P25655 GPI19YDR437W 423 nt1.86□□□□□ -2.11
CDC39P25655 KXD1YGL079W 657 nt1.86□□□□□ -2.11
CDC39P25655 DID4YKL002W 699 nt1.86□□□□□ -2.11
CDC39P25655 ATG34YOL083W 1239 nt1.86□□□□□ -2.11
CDC39P25655 POS5YPL188W 1245 nt1.86□□□□□ -2.11
CDC39P25655 YGL176CYGL176C 1665 nt1.86□□□□□ -2.11
CDC39P25655 YPK1YKL126W 2043 nt1.86□□□□□ -2.11
CDC39P25655 PIN4YBL051C 2007 nt1.86□□□□□ -2.11
CDC39P25655 SKO1YNL167C 1944 nt1.86□□□□□ -2.11
CDC39P25655 TGL2YDR058C 981 nt1.85□□□□□ -2.11
CDC39P25655 GRX3YDR098C 858 nt1.85□□□□□ -2.11
CDC39P25655 CAB2YIL083C 1098 nt1.85□□□□□ -2.11
CDC39P25655 YBL094CYBL094C 333 nt1.85□□□□□ -2.11
CDC39P25655 HUB1YNR032C-A 222 nt1.85□□□□□ -2.11
CDC39P25655 RPS11BYBR048W 471 nt1.85□□□□□ -2.11
CDC39P25655 YPR053CYPR053C 456 nt1.85□□□□□ -2.11
CDC39P25655 SEC66YBR171W 621 nt1.85□□□□□ -2.11
CDC39P25655 SAD1YFR005C 1347 nt1.85□□□□□ -2.11
CDC39P25655 YDR239CYDR239C 2364 nt1.85□□□□□ -2.11
CDC39P25655 MAK11YKL021C 1407 nt1.85□□□□□ -2.11
CDC39P25655 IRC8YJL051W 2469 nt1.85□□□□□ -2.11
CDC39P25655 RAD5YLR032W 3510 nt1.85□□□□□ -2.11
CDC39P25655 UTP22YGR090W 3714 nt1.85□□□□□ -2.11
CDC39P25655 CTM1YHR109W 1758 nt1.85□□□□□ -2.11
CDC39P25655 BSC2YDR275W 708 nt1.85□□□□□ -2.11
CDC39P25655 YNL144W-AYNL144W-A 84 nt1.85□□□□□ -2.11
CDC39P25655 SEC59YMR013C 1560 nt1.85□□□□□ -2.11
CDC39P25655 MMS1YPR164W 4224 nt1.85□□□□□ -2.11
CDC39P25655 SRP68YPL243W 1800 nt1.84□□□□□ -2.11
CDC39P25655 YOR097CYOR097C 528 nt1.84□□□□□ -2.11
CDC39P25655 SUR1YPL057C 1149 nt1.84□□□□□ -2.11
CDC39P25655 PSY2YNL201C 2577 nt1.84□□□□□ -2.11
CDC39P25655 YHL012WYHL012W 1482 nt1.84□□□□□ -2.11
CDC39P25655 SGM1YJR134C 2124 nt1.84□□□□□ -2.11
CDC39P25655 SCH9YHR205W 2475 nt1.84□□□□□ -2.12
CDC39P25655 YBL005W-AYBL005W-A 1323 nt1.84□□□□□ -2.12
CDC39P25655 YMR046CYMR046C 1323 nt1.84□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms