Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 SERBP1P1-201ENST00000396021 1160 ntBASIC18.87■□□□□ 0.61
MRPL3P09001 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.87■□□□□ 0.61
MRPL3P09001 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
MRPL3P09001 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL3P09001 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MRPL3P09001 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL3P09001 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL3P09001 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
MRPL3P09001 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MRPL3P09001 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
MRPL3P09001 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MRPL3P09001 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.86■□□□□ 0.61
MRPL3P09001 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.86■□□□□ 0.61
MRPL3P09001 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.86■□□□□ 0.61
MRPL3P09001 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.86■□□□□ 0.61
MRPL3P09001 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL3P09001 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MRPL3P09001 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MRPL3P09001 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MRPL3P09001 SYT6-210ENST00000641643 1587 ntBASIC18.85■□□□□ 0.61
MRPL3P09001 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.85■□□□□ 0.61
MRPL3P09001 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MRPL3P09001 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
MRPL3P09001 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.85■□□□□ 0.61
MRPL3P09001 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.85■□□□□ 0.61
MRPL3P09001 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.85■□□□□ 0.61
MRPL3P09001 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.85■□□□□ 0.61
MRPL3P09001 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
MRPL3P09001 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
MRPL3P09001 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL3P09001 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.85■□□□□ 0.61
MRPL3P09001 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL3P09001 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL3P09001 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL3P09001 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.84■□□□□ 0.61
MRPL3P09001 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL3P09001 SLC47A1P1-202ENST00000449666 945 ntBASIC18.84■□□□□ 0.61
MRPL3P09001 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.84■□□□□ 0.61
MRPL3P09001 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL3P09001 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL3P09001 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRPL3P09001 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MRPL3P09001 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.83■□□□□ 0.6
MRPL3P09001 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
MRPL3P09001 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
MRPL3P09001 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL3P09001 FEM1AP1-201ENST00000431297 1995 ntBASIC18.82■□□□□ 0.6
MRPL3P09001 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.82■□□□□ 0.6
MRPL3P09001 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.82■□□□□ 0.6
MRPL3P09001 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MRPL3P09001 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.82■□□□□ 0.6
MRPL3P09001 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.82■□□□□ 0.6
MRPL3P09001 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
MRPL3P09001 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.82■□□□□ 0.6
MRPL3P09001 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL3P09001 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MRPL3P09001 AC092667.1-201ENST00000434301 2586 ntBASIC18.82■□□□□ 0.6
MRPL3P09001 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.81■□□□□ 0.6
MRPL3P09001 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
MRPL3P09001 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms