Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPN1P07384 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
CAPN1P07384 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN1P07384 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN1P07384 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN1P07384 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN1P07384 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN1P07384 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN1P07384 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN1P07384 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.7■□□□□ 0.9
CAPN1P07384 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN1P07384 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN1P07384 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CAPN1P07384 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN1P07384 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CAPN1P07384 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN1P07384 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN1P07384 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CAPN1P07384 LINC02228-203ENST00000641970 1355 ntBASIC20.7■□□□□ 0.9
CAPN1P07384 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN1P07384 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN1P07384 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPN1P07384 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CAPN1P07384 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN1P07384 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPN1P07384 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPN1P07384 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CAPN1P07384 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CAPN1P07384 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CAPN1P07384 KRT18P14-201ENST00000534205 1250 ntBASIC20.69■□□□□ 0.9
CAPN1P07384 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.69■□□□□ 0.9
CAPN1P07384 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN1P07384 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN1P07384 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN1P07384 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN1P07384 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN1P07384 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN1P07384 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CAPN1P07384 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.68■□□□□ 0.9
CAPN1P07384 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.68■□□□□ 0.9
CAPN1P07384 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN1P07384 AC092437.1-201ENST00000624794 1048 ntBASIC20.68■□□□□ 0.9
CAPN1P07384 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPN1P07384 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN1P07384 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPN1P07384 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 AP004607.7-201ENST00000527152 1677 ntBASIC20.67■□□□□ 0.9
CAPN1P07384 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CAPN1P07384 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN1P07384 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CAPN1P07384 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN1P07384 AL034346.1-201ENST00000568244 1277 ntBASIC20.67■□□□□ 0.9
CAPN1P07384 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 AF106564.1-201ENST00000607058 2553 ntBASIC20.67■□□□□ 0.9
CAPN1P07384 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN1P07384 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN1P07384 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CAPN1P07384 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN1P07384 FEM1AP4-201ENST00000443167 1987 ntBASIC20.66■□□□□ 0.9
CAPN1P07384 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN1P07384 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN1P07384 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN1P07384 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CAPN1P07384 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CAPN1P07384 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN1P07384 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPN1P07384 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.66■□□□□ 0.9
CAPN1P07384 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.66■□□□□ 0.9
CAPN1P07384 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN1P07384 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.65■□□□□ 0.9
CAPN1P07384 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms