Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSDP07339 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.48■□□□□ 0.39
CTSDP07339 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.48■□□□□ 0.39
CTSDP07339 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTSDP07339 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.48■□□□□ 0.39
CTSDP07339 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.48■□□□□ 0.39
CTSDP07339 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 AC007952.6-201ENST00000573168 2673 ntBASIC17.48■□□□□ 0.39
CTSDP07339 AC003957.1-201ENST00000625108 2673 ntBASIC17.48■□□□□ 0.39
CTSDP07339 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSDP07339 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSDP07339 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.47■□□□□ 0.39
CTSDP07339 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CTSDP07339 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSDP07339 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTSDP07339 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSDP07339 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CTSDP07339 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSDP07339 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CTSDP07339 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTSDP07339 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTSDP07339 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CTSDP07339 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTSDP07339 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.46■□□□□ 0.39
CTSDP07339 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CTSDP07339 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CTSDP07339 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 OR2I1P-207ENST00000453522 948 ntBASIC17.46■□□□□ 0.39
CTSDP07339 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.46■□□□□ 0.39
CTSDP07339 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.46■□□□□ 0.39
CTSDP07339 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CTSDP07339 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSDP07339 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTSDP07339 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CTSDP07339 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTSDP07339 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CTSDP07339 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 AC006455.2-201ENST00000429931 906 ntBASIC17.45■□□□□ 0.38
CTSDP07339 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CTSDP07339 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.45■□□□□ 0.38
CTSDP07339 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.45■□□□□ 0.38
CTSDP07339 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTSDP07339 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSDP07339 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CTSDP07339 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.44■□□□□ 0.38
CTSDP07339 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CTSDP07339 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTSDP07339 PLK5-205ENST00000642079 1969 ntBASIC17.44■□□□□ 0.38
CTSDP07339 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTSDP07339 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTSDP07339 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CTSDP07339 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.44■□□□□ 0.38
CTSDP07339 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.44■□□□□ 0.38
CTSDP07339 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.44■□□□□ 0.38
CTSDP07339 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTSDP07339 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTSDP07339 MIR4787-201ENST00000607364 84 ntBASIC17.44■□□□□ 0.38
CTSDP07339 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms