Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
COL5A2P05997 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.12■■■□□ 2.09
COL5A2P05997 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
COL5A2P05997 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
COL5A2P05997 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
COL5A2P05997 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
COL5A2P05997 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
COL5A2P05997 CYP2T3P-201ENST00000601990 817 ntBASIC28.12■■■□□ 2.09
COL5A2P05997 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC28.12■■■□□ 2.09
COL5A2P05997 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC28.12■■■□□ 2.09
COL5A2P05997 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
COL5A2P05997 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.11■■■□□ 2.09
COL5A2P05997 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.11■■■□□ 2.09
COL5A2P05997 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL5A2P05997 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
COL5A2P05997 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
COL5A2P05997 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
COL5A2P05997 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
COL5A2P05997 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
COL5A2P05997 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC28.11■■■□□ 2.09
COL5A2P05997 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC28.11■■■□□ 2.09
COL5A2P05997 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
COL5A2P05997 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
COL5A2P05997 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL5A2P05997 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL5A2P05997 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL5A2P05997 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC28.11■■■□□ 2.09
COL5A2P05997 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL5A2P05997 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL5A2P05997 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL5A2P05997 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC28.1■■■□□ 2.09
COL5A2P05997 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL5A2P05997 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
COL5A2P05997 AC091799.1-201ENST00000422823 811 ntBASIC28.1■■■□□ 2.09
COL5A2P05997 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC28.1■■■□□ 2.09
COL5A2P05997 MIR4497-201ENST00000583208 89 ntBASIC28.1■■■□□ 2.09
COL5A2P05997 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC28.1■■■□□ 2.09
COL5A2P05997 AC087742.1-201ENST00000575880 1738 ntBASIC28.1■■■□□ 2.09
COL5A2P05997 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL5A2P05997 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
COL5A2P05997 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.1■■■□□ 2.09
COL5A2P05997 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.09■■■□□ 2.09
COL5A2P05997 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
COL5A2P05997 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
COL5A2P05997 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
COL5A2P05997 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
COL5A2P05997 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC28.09■■■□□ 2.09
COL5A2P05997 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL5A2P05997 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
COL5A2P05997 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL5A2P05997 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC28.08■■■□□ 2.09
COL5A2P05997 RPPH1-201ENST00000516869 333 ntBASIC28.08■■■□□ 2.09
COL5A2P05997 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC28.08■■■□□ 2.09
COL5A2P05997 AC233263.1-201ENST00000578059 224 ntBASIC28.08■■■□□ 2.09
COL5A2P05997 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC28.08■■■□□ 2.09
COL5A2P05997 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC28.08■■■□□ 2.09
COL5A2P05997 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC28.08■■■□□ 2.09
COL5A2P05997 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
COL5A2P05997 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL5A2P05997 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
COL5A2P05997 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL5A2P05997 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC28.08■■■□□ 2.09
COL5A2P05997 PNMA6B-201ENST00000538162 1200 ntBASIC28.08■■■□□ 2.09
COL5A2P05997 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC28.08■■■□□ 2.09
COL5A2P05997 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC28.08■■■□□ 2.09
COL5A2P05997 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC28.08■■■□□ 2.09
COL5A2P05997 AC100791.3-201ENST00000617619 330 ntBASIC28.08■■■□□ 2.09
COL5A2P05997 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC28.08■■■□□ 2.08
COL5A2P05997 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
COL5A2P05997 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL5A2P05997 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL5A2P05997 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
COL5A2P05997 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL5A2P05997 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.07■■■□□ 2.08
COL5A2P05997 MIR718-201ENST00000390190 70 ntBASIC28.07■■■□□ 2.08
COL5A2P05997 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
COL5A2P05997 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
COL5A2P05997 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC28.07■■■□□ 2.08
COL5A2P05997 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL5A2P05997 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
COL5A2P05997 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC28.06■■■□□ 2.08
COL5A2P05997 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC28.06■■■□□ 2.08
COL5A2P05997 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC28.06■■■□□ 2.08
COL5A2P05997 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC28.06■■■□□ 2.08
COL5A2P05997 AC073912.3-201ENST00000624414 853 ntBASIC28.06■■■□□ 2.08
COL5A2P05997 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL5A2P05997 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL5A2P05997 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL5A2P05997 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL5A2P05997 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
COL5A2P05997 C1QBPP2-201ENST00000528754 825 ntBASIC28.05■■■□□ 2.08
COL5A2P05997 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC28.05■■■□□ 2.08
COL5A2P05997 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
COL5A2P05997 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
COL5A2P05997 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC28.05■■■□□ 2.08
COL5A2P05997 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
COL5A2P05997 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL5A2P05997 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
COL5A2P05997 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC28.04■■■□□ 2.08
COL5A2P05997 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms