Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.3■□□□□ 0.68
P04436 AC231657.2-201ENST00000624556 255 ntBASIC19.3■□□□□ 0.68
P04436 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
P04436 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P04436 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.3■□□□□ 0.68
P04436 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P04436 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04436 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04436 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04436 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04436 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04436 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
P04436 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04436 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.29■□□□□ 0.68
P04436 AC006970.2-201ENST00000450065 779 ntBASIC19.29■□□□□ 0.68
P04436 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
P04436 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.29■□□□□ 0.68
P04436 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
P04436 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04436 AC010542.4-201ENST00000563151 1910 ntBASIC19.29■□□□□ 0.68
P04436 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.28■□□□□ 0.68
P04436 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
P04436 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.28■□□□□ 0.68
P04436 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.28■□□□□ 0.68
P04436 AC007322.1-201ENST00000426983 750 ntBASIC19.28■□□□□ 0.68
P04436 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 DUX4L16-201ENST00000555130 1264 ntBASIC19.28■□□□□ 0.68
P04436 RAP2CP1-201ENST00000605103 478 ntBASIC19.28■□□□□ 0.68
P04436 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.28■□□□□ 0.68
P04436 AC010536.3-201ENST00000620306 533 ntBASIC19.28■□□□□ 0.68
P04436 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04436 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.27■□□□□ 0.68
P04436 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.27■□□□□ 0.68
P04436 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04436 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.27■□□□□ 0.68
P04436 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.27■□□□□ 0.68
P04436 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
P04436 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.27■□□□□ 0.67
P04436 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P04436 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
P04436 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04436 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
P04436 ECEL1P1-201ENST00000373592 1742 ntBASIC19.26■□□□□ 0.67
P04436 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04436 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P04436 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.26■□□□□ 0.67
P04436 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.26■□□□□ 0.67
P04436 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04436 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.26■□□□□ 0.67
P04436 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.26■□□□□ 0.67
P04436 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.26■□□□□ 0.67
P04436 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04436 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.26■□□□□ 0.67
P04436 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04436 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04436 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
P04436 KRT16P2-201ENST00000414673 1423 ntBASIC19.25■□□□□ 0.67
P04436 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.25■□□□□ 0.67
P04436 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.25■□□□□ 0.67
P04436 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
P04436 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P04436 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.25■□□□□ 0.67
P04436 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.25■□□□□ 0.67
P04436 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.25■□□□□ 0.67
P04436 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
P04436 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04436 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04436 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.24■□□□□ 0.67
P04436 AC061975.6-201ENST00000579045 1553 ntBASIC19.24■□□□□ 0.67
P04436 ID1-201ENST00000376105 1233 ntBASIC19.24■□□□□ 0.67
P04436 MIR663A-201ENST00000385250 93 ntBASIC19.24■□□□□ 0.67
P04436 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms