Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV3P03979 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.56■□□□□ 0.24
TRGV3P03979 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV3P03979 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.56■□□□□ 0.24
TRGV3P03979 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.56■□□□□ 0.24
TRGV3P03979 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRGV3P03979 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.56■□□□□ 0.24
TRGV3P03979 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV3P03979 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRGV3P03979 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.56■□□□□ 0.24
TRGV3P03979 AC026271.2-201ENST00000428091 497 ntBASIC16.56■□□□□ 0.24
TRGV3P03979 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.56■□□□□ 0.24
TRGV3P03979 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.56■□□□□ 0.24
TRGV3P03979 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRGV3P03979 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV3P03979 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TRGV3P03979 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV3P03979 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV3P03979 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.56■□□□□ 0.24
TRGV3P03979 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.55■□□□□ 0.24
TRGV3P03979 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRGV3P03979 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.55■□□□□ 0.24
TRGV3P03979 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRGV3P03979 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRGV3P03979 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.55■□□□□ 0.24
TRGV3P03979 MIR5787-201ENST00000611784 55 ntBASIC16.55■□□□□ 0.24
TRGV3P03979 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRGV3P03979 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRGV3P03979 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRGV3P03979 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV3P03979 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.54■□□□□ 0.24
TRGV3P03979 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRGV3P03979 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.54■□□□□ 0.24
TRGV3P03979 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.54■□□□□ 0.24
TRGV3P03979 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.54■□□□□ 0.24
TRGV3P03979 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.54■□□□□ 0.24
TRGV3P03979 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.54■□□□□ 0.24
TRGV3P03979 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 DUX4L2-201ENST00000561772 1275 ntBASIC16.54■□□□□ 0.24
TRGV3P03979 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.54■□□□□ 0.24
TRGV3P03979 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
TRGV3P03979 DUX4L6-201ENST00000626483 1275 ntBASIC16.54■□□□□ 0.24
TRGV3P03979 DUX4L1-201ENST00000627662 1275 ntBASIC16.54■□□□□ 0.24
TRGV3P03979 DUX4L8-201ENST00000629013 1275 ntBASIC16.54■□□□□ 0.24
TRGV3P03979 DUX4L3-201ENST00000630187 1275 ntBASIC16.54■□□□□ 0.24
TRGV3P03979 DUX4L7-201ENST00000630678 1275 ntBASIC16.54■□□□□ 0.24
TRGV3P03979 DUX4L5-201ENST00000630834 1275 ntBASIC16.54■□□□□ 0.24
TRGV3P03979 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.54■□□□□ 0.24
TRGV3P03979 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV3P03979 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV3P03979 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.53■□□□□ 0.24
TRGV3P03979 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRGV3P03979 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.53■□□□□ 0.24
TRGV3P03979 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRGV3P03979 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV3P03979 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.53■□□□□ 0.24
TRGV3P03979 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.53■□□□□ 0.24
TRGV3P03979 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.53■□□□□ 0.24
TRGV3P03979 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV3P03979 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRGV3P03979 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRGV3P03979 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV3P03979 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV3P03979 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV3P03979 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV3P03979 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms