Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.69■□□□□ 0.26
IFNA1P01562 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.69■□□□□ 0.26
IFNA1P01562 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
IFNA1P01562 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
IFNA1P01562 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.69■□□□□ 0.26
IFNA1P01562 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IFNA1P01562 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 AL049796.1-201ENST00000565336 1766 ntBASIC16.69■□□□□ 0.26
IFNA1P01562 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.69■□□□□ 0.26
IFNA1P01562 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.68■□□□□ 0.26
IFNA1P01562 AC009831.1-201ENST00000580420 1582 ntBASIC16.68■□□□□ 0.26
IFNA1P01562 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
IFNA1P01562 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
IFNA1P01562 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
IFNA1P01562 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.68■□□□□ 0.26
IFNA1P01562 AP005212.1-201ENST00000581547 1997 ntBASIC16.68■□□□□ 0.26
IFNA1P01562 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
IFNA1P01562 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
IFNA1P01562 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
IFNA1P01562 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.68■□□□□ 0.26
IFNA1P01562 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNA1P01562 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
IFNA1P01562 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
IFNA1P01562 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.67■□□□□ 0.26
IFNA1P01562 C17orf82-201ENST00000623772 1530 ntBASIC16.67■□□□□ 0.26
IFNA1P01562 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
IFNA1P01562 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.67■□□□□ 0.26
IFNA1P01562 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.67■□□□□ 0.26
IFNA1P01562 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.67■□□□□ 0.26
IFNA1P01562 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
IFNA1P01562 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IFNA1P01562 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNA1P01562 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.67■□□□□ 0.26
IFNA1P01562 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
IFNA1P01562 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.66■□□□□ 0.26
IFNA1P01562 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IFNA1P01562 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNA1P01562 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
IFNA1P01562 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.66■□□□□ 0.26
IFNA1P01562 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNA1P01562 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.66■□□□□ 0.26
IFNA1P01562 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNA1P01562 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.66■□□□□ 0.26
IFNA1P01562 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNA1P01562 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNA1P01562 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNA1P01562 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNA1P01562 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNA1P01562 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.65■□□□□ 0.26
IFNA1P01562 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms