Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1O96005 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1O96005 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1O96005 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.8■□□□□ 0.76
CLPTM1O96005 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.8■□□□□ 0.76
CLPTM1O96005 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.8■□□□□ 0.76
CLPTM1O96005 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1O96005 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1O96005 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1O96005 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1O96005 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPTM1O96005 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 LINC01960-201ENST00000563759 1884 ntBASIC19.79■□□□□ 0.76
CLPTM1O96005 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLPTM1O96005 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPTM1O96005 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CLPTM1O96005 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CLPTM1O96005 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.79■□□□□ 0.76
CLPTM1O96005 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPTM1O96005 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLPTM1O96005 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CLPTM1O96005 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CLPTM1O96005 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPTM1O96005 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPTM1O96005 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1O96005 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLPTM1O96005 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CLPTM1O96005 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.78■□□□□ 0.76
CLPTM1O96005 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLPTM1O96005 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPTM1O96005 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.78■□□□□ 0.76
CLPTM1O96005 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLPTM1O96005 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPTM1O96005 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPTM1O96005 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPTM1O96005 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPTM1O96005 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPTM1O96005 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPTM1O96005 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPTM1O96005 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLPTM1O96005 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLPTM1O96005 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLPTM1O96005 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPTM1O96005 AL356441.2-201ENST00000443009 864 ntBASIC19.77■□□□□ 0.76
CLPTM1O96005 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLPTM1O96005 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPTM1O96005 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPTM1O96005 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.77■□□□□ 0.76
CLPTM1O96005 SNX5-217ENST00000606557 1087 ntBASIC19.77■□□□□ 0.76
CLPTM1O96005 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLPTM1O96005 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLPTM1O96005 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLPTM1O96005 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPTM1O96005 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLPTM1O96005 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLPTM1O96005 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.77■□□□□ 0.75
CLPTM1O96005 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.76■□□□□ 0.75
CLPTM1O96005 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLPTM1O96005 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPTM1O96005 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPTM1O96005 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPTM1O96005 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPTM1O96005 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.76■□□□□ 0.75
CLPTM1O96005 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.76■□□□□ 0.75
CLPTM1O96005 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLPTM1O96005 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.76■□□□□ 0.75
CLPTM1O96005 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.76■□□□□ 0.75
CLPTM1O96005 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPTM1O96005 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPTM1O96005 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.76■□□□□ 0.75
CLPTM1O96005 AP005212.1-201ENST00000581547 1997 ntBASIC19.75■□□□□ 0.75
CLPTM1O96005 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.75■□□□□ 0.75
CLPTM1O96005 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.75■□□□□ 0.75
CLPTM1O96005 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms