Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SIX6O95475 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SIX6O95475 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SIX6O95475 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SIX6O95475 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SIX6O95475 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX6O95475 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX6O95475 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX6O95475 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.62■□□□□ 0.41
SIX6O95475 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SIX6O95475 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SIX6O95475 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SIX6O95475 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SIX6O95475 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 ABHD17AP4-201ENST00000411545 909 ntBASIC17.62■□□□□ 0.41
SIX6O95475 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.62■□□□□ 0.41
SIX6O95475 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.62■□□□□ 0.41
SIX6O95475 DUX4L9-201ENST00000449051 1259 ntBASIC17.62■□□□□ 0.41
SIX6O95475 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SIX6O95475 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SIX6O95475 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX6O95475 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SIX6O95475 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SIX6O95475 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SIX6O95475 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SIX6O95475 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.61■□□□□ 0.41
SIX6O95475 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SIX6O95475 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SIX6O95475 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIX6O95475 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.6■□□□□ 0.41
SIX6O95475 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.6■□□□□ 0.41
SIX6O95475 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SIX6O95475 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.6■□□□□ 0.41
SIX6O95475 AC006128.1-201ENST00000624704 1661 ntBASIC17.6■□□□□ 0.41
SIX6O95475 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.6■□□□□ 0.41
SIX6O95475 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX6O95475 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SIX6O95475 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
SIX6O95475 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
SIX6O95475 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.59■□□□□ 0.41
SIX6O95475 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SIX6O95475 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 DUX4L4-201ENST00000566884 1269 ntBASIC17.59■□□□□ 0.41
SIX6O95475 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 AC026471.1-201ENST00000564629 3026 ntBASIC17.59■□□□□ 0.41
SIX6O95475 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SIX6O95475 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.59■□□□□ 0.41
SIX6O95475 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIX6O95475 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
SIX6O95475 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.58■□□□□ 0.41
SIX6O95475 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX6O95475 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms