Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.17■□□□□ 0.34
SCAF4O95104 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAF4O95104 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCAF4O95104 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.17■□□□□ 0.34
SCAF4O95104 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAF4O95104 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAF4O95104 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.17■□□□□ 0.34
SCAF4O95104 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.17■□□□□ 0.34
SCAF4O95104 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.17■□□□□ 0.34
SCAF4O95104 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SCAF4O95104 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAF4O95104 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SCAF4O95104 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAF4O95104 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.17■□□□□ 0.34
SCAF4O95104 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.17■□□□□ 0.34
SCAF4O95104 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAF4O95104 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAF4O95104 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
SCAF4O95104 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.16■□□□□ 0.34
SCAF4O95104 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 LINC01006-201ENST00000333319 2292 ntBASIC17.16■□□□□ 0.34
SCAF4O95104 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.16■□□□□ 0.34
SCAF4O95104 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.16■□□□□ 0.34
SCAF4O95104 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.16■□□□□ 0.34
SCAF4O95104 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 AL356740.2-201ENST00000601559 647 ntBASIC17.16■□□□□ 0.34
SCAF4O95104 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SCAF4O95104 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SCAF4O95104 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAF4O95104 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SCAF4O95104 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.15■□□□□ 0.34
SCAF4O95104 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.15■□□□□ 0.34
SCAF4O95104 AL117332.1-201ENST00000622628 974 ntBASIC17.15■□□□□ 0.34
SCAF4O95104 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCAF4O95104 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.15■□□□□ 0.34
SCAF4O95104 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SCAF4O95104 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.14■□□□□ 0.33
SCAF4O95104 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SCAF4O95104 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SCAF4O95104 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SCAF4O95104 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SCAF4O95104 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SCAF4O95104 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.14■□□□□ 0.33
SCAF4O95104 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SCAF4O95104 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCAF4O95104 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.14■□□□□ 0.33
SCAF4O95104 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCAF4O95104 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.13■□□□□ 0.33
SCAF4O95104 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SCAF4O95104 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.13■□□□□ 0.33
SCAF4O95104 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAF4O95104 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.13■□□□□ 0.33
SCAF4O95104 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.13■□□□□ 0.33
SCAF4O95104 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.13■□□□□ 0.33
SCAF4O95104 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAF4O95104 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAF4O95104 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCAF4O95104 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.13■□□□□ 0.33
SCAF4O95104 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCAF4O95104 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAF4O95104 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.12■□□□□ 0.33
SCAF4O95104 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms