Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPXO76031 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPXO76031 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.07■□□□□ 0.64
CLPXO76031 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
CLPXO76031 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPXO76031 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPXO76031 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CLPXO76031 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLPXO76031 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
CLPXO76031 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.06■□□□□ 0.64
CLPXO76031 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLPXO76031 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.06■□□□□ 0.64
CLPXO76031 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.06■□□□□ 0.64
CLPXO76031 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPXO76031 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPXO76031 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPXO76031 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.05■□□□□ 0.64
CLPXO76031 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLPXO76031 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLPXO76031 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPXO76031 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.05■□□□□ 0.64
CLPXO76031 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPXO76031 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPXO76031 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPXO76031 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.05■□□□□ 0.64
CLPXO76031 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPXO76031 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLPXO76031 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.05■□□□□ 0.64
CLPXO76031 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPXO76031 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLPXO76031 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLPXO76031 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.04■□□□□ 0.64
CLPXO76031 Z92544.1-202ENST00000571933 1220 ntBASIC19.04■□□□□ 0.64
CLPXO76031 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.04■□□□□ 0.64
CLPXO76031 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLPXO76031 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPXO76031 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.03■□□□□ 0.64
CLPXO76031 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPXO76031 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPXO76031 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPXO76031 AL356441.2-201ENST00000443009 864 ntBASIC19.03■□□□□ 0.64
CLPXO76031 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.03■□□□□ 0.64
CLPXO76031 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 AC098818.2-201ENST00000564925 2320 ntBASIC19.03■□□□□ 0.64
CLPXO76031 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPXO76031 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLPXO76031 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPXO76031 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPXO76031 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPXO76031 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.02■□□□□ 0.64
CLPXO76031 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.02■□□□□ 0.64
CLPXO76031 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPXO76031 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.02■□□□□ 0.64
CLPXO76031 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.02■□□□□ 0.64
CLPXO76031 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.02■□□□□ 0.64
CLPXO76031 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPXO76031 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPXO76031 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPXO76031 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms