Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 AL117332.1-201ENST00000622628 974 ntBASIC17.09■□□□□ 0.33
CLN5O75503 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLN5O75503 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN5O75503 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN5O75503 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.09■□□□□ 0.33
CLN5O75503 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLN5O75503 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN5O75503 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN5O75503 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.08■□□□□ 0.33
CLN5O75503 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLN5O75503 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.08■□□□□ 0.33
CLN5O75503 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLN5O75503 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLN5O75503 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLN5O75503 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLN5O75503 AC010542.4-201ENST00000563151 1910 ntBASIC17.08■□□□□ 0.33
CLN5O75503 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.08■□□□□ 0.33
CLN5O75503 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.08■□□□□ 0.32
CLN5O75503 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CLN5O75503 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLN5O75503 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLN5O75503 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLN5O75503 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.08■□□□□ 0.32
CLN5O75503 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLN5O75503 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.08■□□□□ 0.32
CLN5O75503 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLN5O75503 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.07■□□□□ 0.32
CLN5O75503 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN5O75503 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.07■□□□□ 0.32
CLN5O75503 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.07■□□□□ 0.32
CLN5O75503 AL499627.2-201ENST00000606283 725 ntBASIC17.07■□□□□ 0.32
CLN5O75503 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.07■□□□□ 0.32
CLN5O75503 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.06■□□□□ 0.32
CLN5O75503 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN5O75503 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN5O75503 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN5O75503 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN5O75503 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN5O75503 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLN5O75503 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLN5O75503 AC241377.3-202ENST00000626088 1088 ntBASIC17.06■□□□□ 0.32
CLN5O75503 AC241585.3-202ENST00000628937 1088 ntBASIC17.06■□□□□ 0.32
CLN5O75503 AC245100.8-202ENST00000629247 1058 ntBASIC17.06■□□□□ 0.32
CLN5O75503 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN5O75503 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN5O75503 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLN5O75503 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN5O75503 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLN5O75503 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.05■□□□□ 0.32
CLN5O75503 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN5O75503 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.05■□□□□ 0.32
CLN5O75503 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 KRT16P3-201ENST00000439127 1283 ntBASIC17.05■□□□□ 0.32
CLN5O75503 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN5O75503 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN5O75503 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 CA15P2-201ENST00000611168 834 ntBASIC17.05■□□□□ 0.32
CLN5O75503 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.05■□□□□ 0.32
CLN5O75503 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN5O75503 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms