Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21■□□□□ 0.95
NDUFS3O75489 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21■□□□□ 0.95
NDUFS3O75489 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS3O75489 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS3O75489 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS3O75489 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
NDUFS3O75489 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
NDUFS3O75489 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS3O75489 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NDUFS3O75489 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NDUFS3O75489 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.99■□□□□ 0.95
NDUFS3O75489 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS3O75489 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.99■□□□□ 0.95
NDUFS3O75489 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.99■□□□□ 0.95
NDUFS3O75489 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.99■□□□□ 0.95
NDUFS3O75489 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
NDUFS3O75489 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.99■□□□□ 0.95
NDUFS3O75489 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NDUFS3O75489 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.99■□□□□ 0.95
NDUFS3O75489 FEM1AP4-201ENST00000443167 1987 ntBASIC20.99■□□□□ 0.95
NDUFS3O75489 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS3O75489 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS3O75489 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS3O75489 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.98■□□□□ 0.95
NDUFS3O75489 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NDUFS3O75489 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.98■□□□□ 0.95
NDUFS3O75489 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
NDUFS3O75489 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS3O75489 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.98■□□□□ 0.95
NDUFS3O75489 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS3O75489 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS3O75489 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS3O75489 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS3O75489 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS3O75489 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.98■□□□□ 0.95
NDUFS3O75489 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS3O75489 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS3O75489 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS3O75489 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.97■□□□□ 0.95
NDUFS3O75489 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS3O75489 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.97■□□□□ 0.95
NDUFS3O75489 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS3O75489 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS3O75489 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.97■□□□□ 0.95
NDUFS3O75489 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS3O75489 AC027612.3-201ENST00000413684 1047 ntBASIC20.97■□□□□ 0.95
NDUFS3O75489 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS3O75489 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS3O75489 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
NDUFS3O75489 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.97■□□□□ 0.95
NDUFS3O75489 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NDUFS3O75489 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 AC005229.4-201ENST00000610085 2198 ntBASIC20.96■□□□□ 0.95
NDUFS3O75489 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.96■□□□□ 0.95
NDUFS3O75489 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.96■□□□□ 0.95
NDUFS3O75489 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NDUFS3O75489 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.96■□□□□ 0.95
NDUFS3O75489 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS3O75489 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
NDUFS3O75489 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS3O75489 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.95■□□□□ 0.94
NDUFS3O75489 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS3O75489 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS3O75489 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.95■□□□□ 0.94
NDUFS3O75489 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS3O75489 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS3O75489 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS3O75489 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS3O75489 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NDUFS3O75489 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
NDUFS3O75489 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.95■□□□□ 0.94
NDUFS3O75489 AL024507.2-201ENST00000606070 2574 ntBASIC20.94■□□□□ 0.94
NDUFS3O75489 AF106564.1-201ENST00000607058 2553 ntBASIC20.94■□□□□ 0.94
NDUFS3O75489 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS3O75489 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS3O75489 AC079140.4-201ENST00000507448 529 ntBASIC20.94■□□□□ 0.94
NDUFS3O75489 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.94■□□□□ 0.94
NDUFS3O75489 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS3O75489 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.94■□□□□ 0.94
NDUFS3O75489 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.94■□□□□ 0.94
NDUFS3O75489 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.94■□□□□ 0.94
NDUFS3O75489 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS3O75489 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms