Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDELR3O43731 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.47■■□□□ 1.03
KDELR3O43731 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KDELR3O43731 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KDELR3O43731 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.47■■□□□ 1.03
KDELR3O43731 AL137784.2-201ENST00000607332 1000 ntBASIC21.47■■□□□ 1.03
KDELR3O43731 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDELR3O43731 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.47■■□□□ 1.03
KDELR3O43731 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDELR3O43731 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.47■■□□□ 1.03
KDELR3O43731 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.47■■□□□ 1.03
KDELR3O43731 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
KDELR3O43731 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
KDELR3O43731 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
KDELR3O43731 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDELR3O43731 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.46■■□□□ 1.03
KDELR3O43731 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
KDELR3O43731 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.46■■□□□ 1.03
KDELR3O43731 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
KDELR3O43731 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.46■■□□□ 1.03
KDELR3O43731 AC120498.10-201ENST00000621827 505 ntBASIC21.46■■□□□ 1.03
KDELR3O43731 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
KDELR3O43731 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KDELR3O43731 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.03
KDELR3O43731 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
KDELR3O43731 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
KDELR3O43731 LINC00565-201ENST00000562710 2331 ntBASIC21.45■■□□□ 1.02
KDELR3O43731 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.45■■□□□ 1.02
KDELR3O43731 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
KDELR3O43731 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.45■■□□□ 1.02
KDELR3O43731 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.45■■□□□ 1.02
KDELR3O43731 SLC7A5P1-201ENST00000568957 537 ntBASIC21.45■■□□□ 1.02
KDELR3O43731 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.45■■□□□ 1.02
KDELR3O43731 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDELR3O43731 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.44■■□□□ 1.02
KDELR3O43731 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.44■■□□□ 1.02
KDELR3O43731 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.44■■□□□ 1.02
KDELR3O43731 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
KDELR3O43731 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.44■■□□□ 1.02
KDELR3O43731 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.44■■□□□ 1.02
KDELR3O43731 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.44■■□□□ 1.02
KDELR3O43731 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.44■■□□□ 1.02
KDELR3O43731 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
KDELR3O43731 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.44■■□□□ 1.02
KDELR3O43731 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
KDELR3O43731 MYCNOS-205ENST00000641950 531 ntBASIC21.44■■□□□ 1.02
KDELR3O43731 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
KDELR3O43731 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.44■■□□□ 1.02
KDELR3O43731 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
KDELR3O43731 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDELR3O43731 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KDELR3O43731 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.43■■□□□ 1.02
KDELR3O43731 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KDELR3O43731 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.43■■□□□ 1.02
KDELR3O43731 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KDELR3O43731 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KDELR3O43731 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
KDELR3O43731 AC004911.1-201ENST00000416316 871 ntBASIC21.43■■□□□ 1.02
KDELR3O43731 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.43■■□□□ 1.02
KDELR3O43731 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
KDELR3O43731 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.43■■□□□ 1.02
KDELR3O43731 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.43■■□□□ 1.02
KDELR3O43731 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.43■■□□□ 1.02
KDELR3O43731 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.43■■□□□ 1.02
KDELR3O43731 KRT16P2-201ENST00000414673 1423 ntBASIC21.43■■□□□ 1.02
KDELR3O43731 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
KDELR3O43731 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KDELR3O43731 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.43■■□□□ 1.02
KDELR3O43731 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.43■■□□□ 1.02
KDELR3O43731 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.43■■□□□ 1.02
KDELR3O43731 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms