Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PROM1O43490 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20■□□□□ 0.79
PROM1O43490 AC079140.4-201ENST00000507448 529 ntBASIC20■□□□□ 0.79
PROM1O43490 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 SLC25A24-204ENST00000569674 2357 ntBASIC20■□□□□ 0.79
PROM1O43490 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PROM1O43490 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PROM1O43490 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 CCDC92B-201ENST00000575506 885 ntBASIC19.99■□□□□ 0.79
PROM1O43490 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.99■□□□□ 0.79
PROM1O43490 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PROM1O43490 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PROM1O43490 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.99■□□□□ 0.79
PROM1O43490 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PROM1O43490 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.98■□□□□ 0.79
PROM1O43490 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PROM1O43490 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.98■□□□□ 0.79
PROM1O43490 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.98■□□□□ 0.79
PROM1O43490 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
PROM1O43490 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 EEF1DP3-203ENST00000566025 782 ntBASIC19.98■□□□□ 0.79
PROM1O43490 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.98■□□□□ 0.79
PROM1O43490 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PROM1O43490 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PROM1O43490 AC026310.3-201ENST00000625186 2373 ntBASIC19.98■□□□□ 0.79
PROM1O43490 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
PROM1O43490 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
PROM1O43490 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
PROM1O43490 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.97■□□□□ 0.79
PROM1O43490 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.97■□□□□ 0.79
PROM1O43490 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.97■□□□□ 0.79
PROM1O43490 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.97■□□□□ 0.79
PROM1O43490 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.97■□□□□ 0.79
PROM1O43490 AC053503.5-201ENST00000601508 636 ntBASIC19.97■□□□□ 0.79
PROM1O43490 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PROM1O43490 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
PROM1O43490 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PROM1O43490 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.96■□□□□ 0.79
PROM1O43490 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 KRT18P14-201ENST00000534205 1250 ntBASIC19.96■□□□□ 0.79
PROM1O43490 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PROM1O43490 KRT87P-202ENST00000534226 1464 ntBASIC19.96■□□□□ 0.79
PROM1O43490 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.96■□□□□ 0.79
PROM1O43490 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PROM1O43490 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
PROM1O43490 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.95■□□□□ 0.78
PROM1O43490 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.95■□□□□ 0.78
PROM1O43490 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.95■□□□□ 0.78
PROM1O43490 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.95■□□□□ 0.78
PROM1O43490 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PROM1O43490 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PROM1O43490 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PROM1O43490 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
PROM1O43490 AC097381.1-201ENST00000429019 1296 ntBASIC19.95■□□□□ 0.78
PROM1O43490 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PROM1O43490 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.95■□□□□ 0.78
PROM1O43490 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PROM1O43490 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms