Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.95■■□□□ 1.1
MSI1O43347 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.95■■□□□ 1.1
MSI1O43347 MFSD11-216ENST00000590393 1141 ntBASIC21.95■■□□□ 1.1
MSI1O43347 BID-214ENST00000617586 542 ntTSL 5 BASIC21.95■■□□□ 1.1
MSI1O43347 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
MSI1O43347 MYCNOS-205ENST00000641950 531 ntBASIC21.95■■□□□ 1.1
MSI1O43347 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.95■■□□□ 1.1
MSI1O43347 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.95■■□□□ 1.1
MSI1O43347 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.95■■□□□ 1.1
MSI1O43347 FBXW4P1-201ENST00000426721 2239 ntBASIC21.95■■□□□ 1.1
MSI1O43347 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSI1O43347 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
MSI1O43347 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
MSI1O43347 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
MSI1O43347 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.94■■□□□ 1.1
MSI1O43347 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.94■■□□□ 1.1
MSI1O43347 AC080038.1-201ENST00000611274 1154 ntBASIC21.94■■□□□ 1.1
MSI1O43347 RARRES2P11-201ENST00000635158 484 ntBASIC21.94■■□□□ 1.1
MSI1O43347 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSI1O43347 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
MSI1O43347 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSI1O43347 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSI1O43347 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.93■■□□□ 1.1
MSI1O43347 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
MSI1O43347 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSI1O43347 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSI1O43347 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSI1O43347 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSI1O43347 KRT18P11-201ENST00000435214 1283 ntBASIC21.93■■□□□ 1.1
MSI1O43347 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.93■■□□□ 1.1
MSI1O43347 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.93■■□□□ 1.1
MSI1O43347 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.93■■□□□ 1.1
MSI1O43347 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.93■■□□□ 1.1
MSI1O43347 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.93■■□□□ 1.1
MSI1O43347 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSI1O43347 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.92■■□□□ 1.1
MSI1O43347 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MSI1O43347 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.92■■□□□ 1.1
MSI1O43347 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MSI1O43347 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.92■■□□□ 1.1
MSI1O43347 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.92■■□□□ 1.1
MSI1O43347 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.92■■□□□ 1.1
MSI1O43347 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MSI1O43347 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.92■■□□□ 1.1
MSI1O43347 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
MSI1O43347 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.91■■□□□ 1.1
MSI1O43347 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.91■■□□□ 1.1
MSI1O43347 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.91■■□□□ 1.1
MSI1O43347 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.91■■□□□ 1.1
MSI1O43347 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.91■■□□□ 1.1
MSI1O43347 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.91■■□□□ 1.1
MSI1O43347 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.91■■□□□ 1.1
MSI1O43347 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MSI1O43347 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.91■■□□□ 1.1
MSI1O43347 AC008175.2-201ENST00000612840 297 ntBASIC21.91■■□□□ 1.1
MSI1O43347 AC073111.5-205ENST00000641717 521 ntBASIC21.91■■□□□ 1.1
MSI1O43347 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.91■■□□□ 1.1
MSI1O43347 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.91■■□□□ 1.1
MSI1O43347 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSI1O43347 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
MSI1O43347 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSI1O43347 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.9■■□□□ 1.1
MSI1O43347 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MSI1O43347 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSI1O43347 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSI1O43347 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.9■■□□□ 1.1
MSI1O43347 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSI1O43347 AC090192.1-201ENST00000517740 490 ntBASIC21.9■■□□□ 1.1
MSI1O43347 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
MSI1O43347 KRT18P20-201ENST00000548986 1279 ntBASIC21.9■■□□□ 1.1
MSI1O43347 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.9■■□□□ 1.1
MSI1O43347 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MSI1O43347 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.9■■□□□ 1.1
MSI1O43347 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms