Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLDN5O00501 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLDN5O00501 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.33■■□□□ 1.17
CLDN5O00501 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.33■■□□□ 1.17
CLDN5O00501 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.33■■□□□ 1.17
CLDN5O00501 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLDN5O00501 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLDN5O00501 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.33■■□□□ 1.16
CLDN5O00501 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.32■■□□□ 1.16
CLDN5O00501 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN5O00501 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.32■■□□□ 1.16
CLDN5O00501 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN5O00501 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN5O00501 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.32■■□□□ 1.16
CLDN5O00501 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
CLDN5O00501 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.32■■□□□ 1.16
CLDN5O00501 KRT18P20-201ENST00000548986 1279 ntBASIC22.32■■□□□ 1.16
CLDN5O00501 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.32■■□□□ 1.16
CLDN5O00501 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN5O00501 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN5O00501 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.32■■□□□ 1.16
CLDN5O00501 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.32■■□□□ 1.16
CLDN5O00501 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN5O00501 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN5O00501 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CLDN5O00501 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN5O00501 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CLDN5O00501 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.31■■□□□ 1.16
CLDN5O00501 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CLDN5O00501 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN5O00501 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.31■■□□□ 1.16
CLDN5O00501 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN5O00501 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.31■■□□□ 1.16
CLDN5O00501 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN5O00501 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN5O00501 RAP2CP1-201ENST00000605103 478 ntBASIC22.31■■□□□ 1.16
CLDN5O00501 AC008175.2-201ENST00000612840 297 ntBASIC22.31■■□□□ 1.16
CLDN5O00501 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN5O00501 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
CLDN5O00501 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.31■■□□□ 1.16
CLDN5O00501 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN5O00501 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN5O00501 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.3■■□□□ 1.16
CLDN5O00501 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN5O00501 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.3■■□□□ 1.16
CLDN5O00501 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN5O00501 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN5O00501 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN5O00501 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.3■■□□□ 1.16
CLDN5O00501 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.3■■□□□ 1.16
CLDN5O00501 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.3■■□□□ 1.16
CLDN5O00501 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.3■■□□□ 1.16
CLDN5O00501 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN5O00501 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.3■■□□□ 1.16
CLDN5O00501 FBXW4P1-201ENST00000426721 2239 ntBASIC22.3■■□□□ 1.16
CLDN5O00501 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN5O00501 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.29■■□□□ 1.16
CLDN5O00501 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CLDN5O00501 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN5O00501 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN5O00501 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CLDN5O00501 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.29■■□□□ 1.16
CLDN5O00501 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN5O00501 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN5O00501 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN5O00501 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.29■■□□□ 1.16
CLDN5O00501 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
CLDN5O00501 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
CLDN5O00501 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CLDN5O00501 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 POU5F1P4-201ENST00000413175 1085 ntBASIC22.28■■□□□ 1.16
CLDN5O00501 DUX4L16-201ENST00000555130 1264 ntBASIC22.28■■□□□ 1.16
CLDN5O00501 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.28■■□□□ 1.16
CLDN5O00501 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.28■■□□□ 1.16
CLDN5O00501 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN5O00501 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.27■■□□□ 1.16
CLDN5O00501 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.27■■□□□ 1.16
CLDN5O00501 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.27■■□□□ 1.16
CLDN5O00501 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN5O00501 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.27■■□□□ 1.16
CLDN5O00501 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN5O00501 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN5O00501 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.27■■□□□ 1.16
CLDN5O00501 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.27■■□□□ 1.16
CLDN5O00501 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.27■■□□□ 1.16
CLDN5O00501 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN5O00501 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN5O00501 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.27■■□□□ 1.16
CLDN5O00501 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.27■■□□□ 1.16
CLDN5O00501 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CLDN5O00501 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN5O00501 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms