Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.98■□□□□ 0.95
CFAP99D6REC4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP99D6REC4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CFAP99D6REC4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP99D6REC4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.98■□□□□ 0.95
CFAP99D6REC4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP99D6REC4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.98■□□□□ 0.95
CFAP99D6REC4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.98■□□□□ 0.95
CFAP99D6REC4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CFAP99D6REC4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CFAP99D6REC4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP99D6REC4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP99D6REC4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP99D6REC4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFAP99D6REC4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP99D6REC4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP99D6REC4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CFAP99D6REC4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.97■□□□□ 0.95
CFAP99D6REC4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.97■□□□□ 0.95
CFAP99D6REC4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP99D6REC4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.97■□□□□ 0.95
CFAP99D6REC4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.97■□□□□ 0.95
CFAP99D6REC4 AC087623.3-201ENST00000607047 1098 ntBASIC20.97■□□□□ 0.95
CFAP99D6REC4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP99D6REC4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP99D6REC4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP99D6REC4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.97■□□□□ 0.95
CFAP99D6REC4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.97■□□□□ 0.95
CFAP99D6REC4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CFAP99D6REC4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP99D6REC4 AC007375.3-201ENST00000600936 2314 ntBASIC20.96■□□□□ 0.95
CFAP99D6REC4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.96■□□□□ 0.95
CFAP99D6REC4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP99D6REC4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.96■□□□□ 0.95
CFAP99D6REC4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP99D6REC4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP99D6REC4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.96■□□□□ 0.95
CFAP99D6REC4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.96■□□□□ 0.95
CFAP99D6REC4 AC026271.2-201ENST00000428091 497 ntBASIC20.96■□□□□ 0.95
CFAP99D6REC4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.96■□□□□ 0.95
CFAP99D6REC4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.96■□□□□ 0.95
CFAP99D6REC4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP99D6REC4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.96■□□□□ 0.95
CFAP99D6REC4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP99D6REC4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP99D6REC4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CFAP99D6REC4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.95■□□□□ 0.95
CFAP99D6REC4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 MIR935-201ENST00000401179 91 ntBASIC20.95■□□□□ 0.94
CFAP99D6REC4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 MIR5787-201ENST00000611784 55 ntBASIC20.95■□□□□ 0.94
CFAP99D6REC4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP99D6REC4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP99D6REC4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP99D6REC4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP99D6REC4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
CFAP99D6REC4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CFAP99D6REC4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.94■□□□□ 0.94
CFAP99D6REC4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP99D6REC4 DUX4L2-201ENST00000561772 1275 ntBASIC20.94■□□□□ 0.94
CFAP99D6REC4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.94■□□□□ 0.94
CFAP99D6REC4 AC053503.5-201ENST00000601508 636 ntBASIC20.94■□□□□ 0.94
CFAP99D6REC4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
CFAP99D6REC4 DUX4L6-201ENST00000626483 1275 ntBASIC20.94■□□□□ 0.94
CFAP99D6REC4 DUX4L1-201ENST00000627662 1275 ntBASIC20.94■□□□□ 0.94
CFAP99D6REC4 DUX4L8-201ENST00000629013 1275 ntBASIC20.94■□□□□ 0.94
CFAP99D6REC4 DUX4L3-201ENST00000630187 1275 ntBASIC20.94■□□□□ 0.94
CFAP99D6REC4 DUX4L7-201ENST00000630678 1275 ntBASIC20.94■□□□□ 0.94
CFAP99D6REC4 DUX4L5-201ENST00000630834 1275 ntBASIC20.94■□□□□ 0.94
CFAP99D6REC4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP99D6REC4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP99D6REC4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CFAP99D6REC4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 AC244015.2-201ENST00000616358 1861 ntBASIC20.93■□□□□ 0.94
CFAP99D6REC4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.93■□□□□ 0.94
CFAP99D6REC4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP99D6REC4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.93■□□□□ 0.94
CFAP99D6REC4 EEF1DP3-203ENST00000566025 782 ntBASIC20.93■□□□□ 0.94
CFAP99D6REC4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms