Protein–RNA interactions for Protein: A6NI56

CCDC154, Coiled-coil domain-containing protein 154, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC154A6NI56 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC154A6NI56 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC154A6NI56 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC154A6NI56 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 FEM1AP1-201ENST00000431297 1995 ntBASIC20.19■□□□□ 0.82
CCDC154A6NI56 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC154A6NI56 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC154A6NI56 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
CCDC154A6NI56 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC154A6NI56 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC154A6NI56 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC154A6NI56 AL121603.2-201ENST00000557373 2117 ntBASIC20.18■□□□□ 0.82
CCDC154A6NI56 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC154A6NI56 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC154A6NI56 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC154A6NI56 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC154A6NI56 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC154A6NI56 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC154A6NI56 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC154A6NI56 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC154A6NI56 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC154A6NI56 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CCDC154A6NI56 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC154A6NI56 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC154A6NI56 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC154A6NI56 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC154A6NI56 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC154A6NI56 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC154A6NI56 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC154A6NI56 AC136469.2-201ENST00000623944 1028 ntBASIC20.17■□□□□ 0.82
CCDC154A6NI56 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC154A6NI56 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC154A6NI56 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC154A6NI56 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC154A6NI56 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CCDC154A6NI56 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC154A6NI56 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC154A6NI56 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC154A6NI56 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC154A6NI56 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC154A6NI56 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC154A6NI56 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC154A6NI56 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC154A6NI56 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC154A6NI56 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC154A6NI56 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC154A6NI56 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC154A6NI56 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 AC011298.3-201ENST00000615796 283 ntBASIC20.15■□□□□ 0.82
CCDC154A6NI56 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC154A6NI56 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC154A6NI56 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC154A6NI56 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC154A6NI56 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC154A6NI56 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC154A6NI56 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC154A6NI56 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC154A6NI56 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC154A6NI56 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC154A6NI56 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC154A6NI56 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC154A6NI56 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC154A6NI56 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCDC154A6NI56 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC154A6NI56 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC154A6NI56 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC154A6NI56 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC154A6NI56 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC154A6NI56 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC154A6NI56 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC154A6NI56 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC154A6NI56 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCDC154A6NI56 SLC47A1P1-202ENST00000449666 945 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms