Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 C9orf163-202ENST00000624034 2573 ntBASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 AC080038.3-201ENST00000623346 1952 ntBASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3BA6NDS4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.45■■□□□ 1.03
TBC1D3BA6NDS4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3BA6NDS4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 BX276092.2-201ENST00000417668 665 ntBASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 FAM201B-201ENST00000458407 597 ntBASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 MIR4651-201ENST00000582622 73 ntBASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3BA6NDS4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 AC243732.1-201ENST00000612648 864 ntBASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
TBC1D3BA6NDS4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 AL162412.1-201ENST00000567129 965 ntBASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 AC127496.7-201ENST00000625110 1798 ntBASIC21.42■■□□□ 1.02
TBC1D3BA6NDS4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms