Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.09■□□□□ 0.81
LRIT2A6NDA9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.08■□□□□ 0.81
LRIT2A6NDA9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.08■□□□□ 0.8
LRIT2A6NDA9 AC004854.2-201ENST00000608450 1441 ntBASIC20.08■□□□□ 0.8
LRIT2A6NDA9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRIT2A6NDA9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 AC138907.5-202ENST00000569484 235 ntBASIC20.07■□□□□ 0.8
LRIT2A6NDA9 AC104187.1-201ENST00000607510 612 ntBASIC20.07■□□□□ 0.8
LRIT2A6NDA9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRIT2A6NDA9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 KRT18P61-201ENST00000585825 1298 ntBASIC20.06■□□□□ 0.8
LRIT2A6NDA9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRIT2A6NDA9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 CLDN5-201ENST00000403084 2357 ntBASIC20.05■□□□□ 0.8
LRIT2A6NDA9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRIT2A6NDA9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 NTF6G-201ENST00000591094 616 ntBASIC20.04■□□□□ 0.8
LRIT2A6NDA9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LRIT2A6NDA9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT2A6NDA9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT2A6NDA9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.03■□□□□ 0.8
LRIT2A6NDA9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT2A6NDA9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.03■□□□□ 0.8
LRIT2A6NDA9 FEM1AP4-201ENST00000443167 1987 ntBASIC20.03■□□□□ 0.8
LRIT2A6NDA9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms