Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 PKD1P6-201ENST00000343738 4769 ntBASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 DUX4L2-201ENST00000561772 1275 ntBASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 AC138907.5-202ENST00000569484 235 ntBASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 DUX4L6-201ENST00000626483 1275 ntBASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 DUX4L1-201ENST00000627662 1275 ntBASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 DUX4L8-201ENST00000629013 1275 ntBASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 DUX4L3-201ENST00000630187 1275 ntBASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 DUX4L7-201ENST00000630678 1275 ntBASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 DUX4L5-201ENST00000630834 1275 ntBASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC196A0A1B0GTZ2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 RARRES2P6-201ENST00000567333 442 ntBASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC196A0A1B0GTZ2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 AC026271.2-201ENST00000428091 497 ntBASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 AC087623.3-201ENST00000607047 1098 ntBASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC196A0A1B0GTZ2 AP004607.4-201ENST00000530158 1459 ntBASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CCDC196A0A1B0GTZ2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 POU5F1P4-201ENST00000413175 1085 ntBASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC008175.2-201ENST00000612840 297 ntBASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC196A0A1B0GTZ2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC026310.3-201ENST00000625186 2373 ntBASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC104187.1-201ENST00000607510 612 ntBASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms